RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 PAFAH1B2P68402 229 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 FAM98BQ52LJ0 330 aaKnown RBP7.03□□□□□ -1.28
HDAC8-215ENST00000444609 RNASE12Q5GAN4 147 aaKnown RBP7.03□□□□□ -1.28
HDAC8-215ENST00000444609 C10orf55Q5SWW7 151 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 GSG1LQ6UXU4 331 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 IDO2Q6ZQW0 420 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 ZNF502Q8TBZ5 544 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 MRPL30Q8TCC3 161 aaKnown RBP7.03□□□□□ -1.28
HDAC8-215ENST00000444609 IL1F10Q8WWZ1 152 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 NEU1Q99519 415 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 FEVQ99581 238 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 TBX5Q99593 518 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 C20orf24Q9BUV8 137 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 RHPN1-AS1Q9BWJ2 59 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 JAM3Q9BX67 310 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 C11orf54Q9H0W9 315 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-215ENST00000444609 Q9N2K0 584 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 FAM212BQ9NTI7 297 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-215ENST00000444609 MRGBPQ9NV56 204 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 FRRS1LQ9P0K9 344 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
HDAC8-215ENST00000444609 A0A1W2PP11 408 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 TEX22C9J3V5 150 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 NDUFA4O00483 81 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 ACTL6BO94805 426 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 MT1HL1P0DM35 61 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 SERPINA2P20848 420 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 MAS1LP35410 378 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 HMGN3Q15651 99 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 VMA21Q3ZAQ7 101 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 TMEM236Q5W0B7 351 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 LILRB2Q8N423 598 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 FAM24BQ8N5W8 94 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 PARP16Q8N5Y8 322 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 OR10G2Q8NGC3 310 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 NSL1Q96IY1 281 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 CYYR1Q96J86 154 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 CMTM3Q96MX0 182 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 MAGT1Q9H0U3 335 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 ZNF430Q9H8G1 570 aaPredicted RBP7.02□□□□□ -1.29
HDAC8-215ENST00000444609 SAR1AQ9NR31 198 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 ZNF586Q9NXT0 402 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 FAM30AQ9NZY2 134 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 PEX16Q9Y5Y5 336 aa7.02□□□□□ -1.29
HDAC8-215ENST00000444609 PUS1Q9Y606 427 aaKnown RBP eCLIP7.02□□□□□ -1.29
HDAC8-215ENST00000444609 IGHV3OR16-8A0A075B7F1 116 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 A0A0G2JND7 137 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 IGHV7-4-1A0A0J9YVY3 117 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 C15orf62A8K5M9 175 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 DNAH10OSP0CZ25 163 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 GTF2F2P13984 249 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 HIST1H1BP16401 226 aaKnown RBP7.01□□□□□ -1.29
HDAC8-215ENST00000444609 NANOS3P60323 173 aaKnown RBP7.01□□□□□ -1.29
HDAC8-215ENST00000444609 NXNL2Q5VZ03 156 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 MFSD4AQ8N468 514 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 RNF125Q96EQ8 232 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 OR14A2Q96R54 314 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 ARL8BQ9NVJ2 186 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 PAK1IP1Q9NWT1 392 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-215ENST00000444609 TVP23BQ9NYZ1 205 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 ABRACLQ9P1F3 81 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 ABCD2Q9UBJ2 740 aa7.01□□□□□ -1.29
HDAC8-215ENST00000444609 SAMHD1Q9Y3Z3 626 aaKnown RBP7.01□□□□□ -1.29
HDAC8-215ENST00000444609 IGLV11-55A0A075B6I3 123 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 UBE2QL1A1L167 161 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 DPPA5A6NC42 116 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 SMIM9A6NGZ8 99 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 KNCNA6PVL3 124 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 M0R1X1 148 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 ZNF780AO75290 641 aaPredicted RBP7□□□□□ -1.29
HDAC8-215ENST00000444609 DHFRP00374 187 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 GLAP06280 429 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 OR2T7P0C7T2 308 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 TMEM69Q5SWH9 247 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 ZNF705AQ6ZN79 300 aaPredicted RBP7□□□□□ -1.29
HDAC8-215ENST00000444609 TMEM116Q8NCL8 245 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 OR51A2Q8NGJ7 313 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 PTX4Q96A99 478 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 ELAC2Q9BQ52 826 aaKnown RBP7□□□□□ -1.29
HDAC8-215ENST00000444609 TEX12Q9BXU0 123 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 MS4A6AQ9H2W1 248 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 ISG20L2Q9H9L3 353 aaKnown RBP7□□□□□ -1.29
HDAC8-215ENST00000444609 GNG8Q9UK08 70 aa7□□□□□ -1.29
HDAC8-215ENST00000444609 TRAV2A0A0B4J234 112 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 ZNF705FA8MVS1 300 aaPredicted RBP6.99□□□□□ -1.29
HDAC8-215ENST00000444609 IL6RP08887 468 aaPredicted RBP6.99□□□□□ -1.29
HDAC8-215ENST00000444609 ZNF705DP0CH99 300 aaPredicted RBP6.99□□□□□ -1.29
HDAC8-215ENST00000444609 ZNF705BP0CI00 300 aaPredicted RBP6.99□□□□□ -1.29
HDAC8-215ENST00000444609 OSMP13725 252 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 RAB3AP20336 220 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 PTBP1P26599 531 aaKnown RBP eCLIP6.99□□□□□ -1.29
HDAC8-215ENST00000444609 GNRHRP30968 328 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 CLINT1Q14677 625 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 TP53I3Q53FA7 332 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 AADACL4Q5VUY2 407 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 FDX2Q6P4F2 183 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 MMD2Q8IY49 270 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 SIKE1Q9BRV8 207 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 UPK3BQ9BT76 320 aa6.99□□□□□ -1.29
HDAC8-215ENST00000444609 REEP1Q9H902 201 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms