RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-208	ENST00000444533	PARP11	Q9NR21	331 aa		11.17	□□□□□ -0.62
SSBP3-208	ENST00000444533	SLC2A9	Q9NRM0	540 aa		11.17	□□□□□ -0.62
SSBP3-208	ENST00000444533	FBXO24	O75426	580 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	B3GALNT1	O75752	331 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	ATG12	O94817	140 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	SERPINE2	P07093	398 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	NQO2	P16083	231 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	F2R	P25116	425 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	PIGP	P57054	158 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	TAS2R31	P59538	309 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	GNB1	P62873	340 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	TMEM95	Q3KNT9	176 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	ZNF562	Q6V9R5	426 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	TBC1D26	Q86UD7	250 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	STPG2	Q8N412	459 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	DMBX1	Q8NFW5	382 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	OR5AU1	Q8NGC0	362 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	MARCH1	Q8TCQ1	289 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	TRIM63	Q969Q1	353 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	GPHA2	Q96T91	129 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	WDR12	Q9GZL7	423 aa	Known RBP	11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	PLEKHA2	Q9HB19	425 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	SLC2A8	Q9NY64	477 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	COMMD9	Q9P000	198 aa		11.16	□□□□□ -0.62
SSBP3-208	ENST00000444533	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	NAP1L6	A6NFF2	107 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	MPPED1	O15442	326 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	OR2A4	O95047	310 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	CA2	P00918	260 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	OPN1MW	P04001	364 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	CTSD	P07339	412 aa	Predicted RBP	11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	OPN1MW2	P0DN77	364 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	OPN1MW3	P0DN78	364 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	RND3	P61587	244 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	CX3CL1	P78423	397 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	KLF9	Q13886	244 aa	Predicted RBP	11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	MMD2	Q8IY49	270 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	OR13C8	Q8NGS7	320 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	ARPC1A	Q92747	370 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	RBMXL1	Q96E39	390 aa	Known RBP	11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	RHOV	Q96L33	236 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	OR2A7	Q96R45	310 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	PHB2	Q99623	299 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	HSPB9	Q9BQS6	159 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	CCDC32	Q9BV29	185 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	WNT10A	Q9GZT5	417 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	HRASLS	Q9HDD0	168 aa		11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.15	□□□□□ -0.62
SSBP3-208	ENST00000444533	IGHV7-81	A0A0B4J1V7	117 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	IGLV2-23	P01705	113 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	IGF1	P05019	195 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	ZNF735	P0CB33	412 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	SAA1	P0DJI8	122 aa	Predicted RBP	11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	RPA2	P15927	270 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	ZNF846	Q147U1	533 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	FXYD3	Q14802	87 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	KHDC1L	Q5JSQ8	128 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	TEX38	Q6PEX7	206 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	TMEM65	Q6PI78	240 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	SSX9	Q7RTT3	188 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	OR4A5	Q8NH83	315 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	GRPEL2	Q8TAA5	225 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	NOL4L	Q96MY1	436 aa	Predicted RBP	11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	CITED1	Q99966	193 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	C7orf50	Q9BRJ6	194 aa	Known RBP	11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	KCNIP3	Q9Y2W7	256 aa		11.14	□□□□□ -0.63
SSBP3-208	ENST00000444533	TRAV41	A0A0B4J266	112 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	PIGBOS1	A0A0B4J2F0	54 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	C3orf85	A0A1B0GTC6	90 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	SRRM4	A7MD48	611 aa	Known RBP	11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533		M0QZ24	198 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	ATP6V0E1	O15342	81 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	RAMP3	O60896	148 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	KBTBD11	O94819	623 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	PI3	P19957	117 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	MAS1L	P35410	378 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	LPAR6	P43657	344 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	TNXA	Q16473	311 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	TRIM16L	Q309B1	348 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	SGPP2	Q8IWX5	399 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	C11orf44	Q8N8P7	122 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	SGMS2	Q8NHU3	365 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	R3HDM4	Q96D70	268 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	TMEM68	Q96MH6	324 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	LINC00527	Q9UJ94	153 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	ZNF580	Q9UK33	172 aa		11.13	□□□□□ -0.63
SSBP3-208	ENST00000444533	LINC00854	A0A1B0GVQ3	168 aa		11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533	TCRBV4S1A1T	A0A5B7	111 aa		11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533		H0Y980	276 aa		11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533	FCN1	O00602	326 aa		11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533	SNAPC5	O75971	98 aa		11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533	S1PR2	O95136	353 aa		11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533	ANXA3	P12429	323 aa		11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533	IL7	P13232	177 aa		11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533	RBMS2	Q15434	407 aa	Known RBP	11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533	BAK1	Q16611	211 aa		11.12	□□□□□ -0.63
SSBP3-208	ENST00000444533	PRSS8	Q16651	343 aa		11.12	□□□□□ -0.63

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