RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TAS2R20P59543 309 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 TMEM267Q0VDI3 215 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-203ENST00000444440 OR2B11Q5JQS5 317 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 ZNF645Q8N7E2 425 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 OR5AP2Q8NGF4 316 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 RHOVQ96L33 236 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 B9D2Q9BPU9 175 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 MRPS7Q9Y2R9 242 aaKnown RBP8.37□□□□□ -1.07
SF3A1-203ENST00000444440 PRELID3BQ9Y3B1 194 aa8.37□□□□□ -1.07
SF3A1-203ENST00000444440 FAM25AB3EWG3 89 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 FAM25CB3EWG5 89 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 FAM25GB3EWG6 89 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 LINC01619G3V211 115 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 OVOL1O14753 267 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 NOL3O60936 208 aaKnown RBP8.36□□□□□ -1.07
SF3A1-203ENST00000444440 TUSC2O75896 110 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 TRGV3P03979 118 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 FCER2P06734 321 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 SAA1P0DJI8 122 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-203ENST00000444440 RPL5P46777 297 aaKnown RBP8.36□□□□□ -1.07
SF3A1-203ENST00000444440 C10orf55Q5SWW7 151 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 HAPLN4Q86UW8 402 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 POC5Q8NA72 575 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 HSD17B10Q99714 261 aaKnown RBP8.36□□□□□ -1.07
SF3A1-203ENST00000444440 BCL7BQ9BQE9 202 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 NAA50Q9GZZ1 169 aaKnown RBP8.36□□□□□ -1.07
SF3A1-203ENST00000444440 ADAM30Q9UKF2 790 aa8.36□□□□□ -1.07
SF3A1-203ENST00000444440 DYNC2H1Q8NCM8 4307 aaKnown RBP8.35□□□□□ -1.07
SF3A1-203ENST00000444440 MEIS3P1A6NDR6 274 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 HPGDSO60760 199 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 RAMP3O60896 148 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 FCGR3BO75015 233 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 CNIH1O95406 144 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 TRBV12-3P01733 135 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 EIF4EP06730 217 aaKnown RBP8.35□□□□□ -1.07
SF3A1-203ENST00000444440 FCGR2CP31995 323 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 TMBIM6P55061 237 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 TAS2R46P59540 309 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 UBE2KP61086 200 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 CD69Q07108 199 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 CDK10Q15131 360 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 MSMO1Q15800 293 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 PYHIN1Q6K0P9 492 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 ACSM6Q6P461 480 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 CLVS1Q8IUQ0 354 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-203ENST00000444440 VKORC1L1Q8N0U8 176 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 ZBTB34Q8NCN2 500 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 OSR1Q8TAX0 266 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-203ENST00000444440 RAB2BQ8WUD1 216 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 C15orf40Q8WUR7 153 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 GIMAP1Q8WWP7 306 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 SNAPC3Q92966 411 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 BORCS5Q969J3 196 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 DCUN1D5Q9BTE7 237 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 SCPEP1Q9HB40 452 aa8.35□□□□□ -1.07
SF3A1-203ENST00000444440 RBMX2Q9Y388 322 aaKnown RBP8.35□□□□□ -1.07
SF3A1-203ENST00000444440 A0A1B0GW64 132 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 ANKRD34BA5PLL1 514 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 E7EUB6 86 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 SULT1C2O00338 296 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 TPPPO94811 219 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 PRH1P02810 166 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 HSPB1P04792 205 aaKnown RBP8.34□□□□□ -1.07
SF3A1-203ENST00000444440 SPNP16150 400 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 NAT1P18440 290 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 ELK1P19419 428 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 AADACP22760 399 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 CD40LGP29965 261 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 HERV-K104P61576 105 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 ZNF45Q02386 682 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 DYRK1AQ13627 763 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 TNXAQ16473 311 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 PRSS8Q16651 343 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 VMA21Q3ZAQ7 101 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 VAX1Q5SQQ9 334 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 DHRS11Q6UWP2 260 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 C19orf35Q6ZS72 473 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 KCTD9Q7L273 389 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 OVCH2Q7RTZ1 564 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 TEX45Q8NA69 505 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 OR5H2Q8NGV7 314 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 SRSF12Q8WXF0 261 aaKnown RBP8.34□□□□□ -1.07
SF3A1-203ENST00000444440 SLC5A7Q9GZV3 580 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 SLA2Q9H6Q3 261 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 ZNF430Q9H8G1 570 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-203ENST00000444440 ZNF355PQ9NSJ1 428 aa8.34□□□□□ -1.07
SF3A1-203ENST00000444440 ZNF256Q9Y2P7 627 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-203ENST00000444440 STARD9Q9P2P6 4700 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 TENM3Q9P273 2699 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 MSGN1A6NI15 193 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 SAP30O75446 220 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 PPYP01298 95 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 MYOD1P15172 320 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 KIR2DS2P43631 304 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 ZNF66Q6ZN08 573 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 SNX29P2Q8IUI4 249 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 MFSD4AQ8N468 514 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 ADAD2Q8NCV1 583 aaKnown RBP8.33□□□□□ -1.08
SF3A1-203ENST00000444440 GPX8Q8TED1 209 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 SECTM1Q8WVN6 248 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms