RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 IGKV1-39P01597 117 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGKV1D-39P04432 117 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNF728P0DKX0 622 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 RAB5CP51148 216 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 NCR3LG1Q68D85 454 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNF818PQ6ZRF7 136 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 THNSL2Q86YJ6 484 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 SAXO1Q8IYX7 474 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZFP82Q8N141 532 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 PNKDQ8N490 385 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR5P3Q8WZ94 311 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNF714Q96N38 554 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 RARRES2Q99969 163 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 UBR5O95071 2799 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 TRAV1-1A0A0B4J248 108 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 MLNRO43193 412 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 CRLF1O75462 422 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 RHBDL1O75783 438 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 PPYP01298 95 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 SMIM6P0DI80 62 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 S100A10P60903 97 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 ICAM4Q14773 271 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 RHEBQ15382 184 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 C1orf122Q6ZSJ8 110 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR2T6Q8NHC8 308 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZC4H2Q9NQZ6 224 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 GSN-AS1Q9NRJ2 163 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 GSKIPQ9P0R6 139 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 TMED3Q9Y3Q3 217 aa6.09□□□□□ -1.44
CDC42BPA-208ENST00000442054 A0A087WWC5 75 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 LINC00587B1AMM8 73 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 NPIPB11E5RHQ5 1161 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 SRP19P09132 144 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 P0C879 139 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 RAB5AP20339 215 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 OMGP23515 440 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 RBMXP38159 391 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 SPIN3Q5JUX0 258 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 LYPD2Q6UXB3 125 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 Q6ZR03 302 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 FAM90A1Q86YD7 464 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 C11orf44Q8N8P7 122 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR10G4Q8NGN3 311 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 FAM212BQ9NTI7 297 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 STRAPQ9Y3F4 350 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 DIRAS3O95661 229 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 AKR1C3P42330 323 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 RPL35P42766 123 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 SULT1A1P50225 295 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 EIF5AP63241 154 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 MSMPQ1L6U9 139 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 C11orf71Q6IPW1 123 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 WDR82Q6UXN9 313 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 HAPLN4Q86UW8 402 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 MRGPRDQ8TDS7 321 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 MTCH1Q9NZJ7 389 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 IL36RNQ9UBH0 155 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 MLXQ9UH92 298 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 C3orf85A0A1B0GTC6 90 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 MGST3O14880 152 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 BCL3P20749 454 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 SRSF2Q01130 221 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 AESQ08117 197 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 PMS2P11Q13670 270 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZNF726P1Q15940 193 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 SSX7Q7RTT5 188 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 CENPVQ7Z7K6 275 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZNF596Q8TC21 504 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 CABLES2Q9BTV7 478 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 SLC35B3Q9H1N7 401 aa6.08□□□□□ -1.44
CDC42BPA-208ENST00000442054 DUXBA0A1W2PPF3 345 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 TMEM30CPA0ZSE6 113 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 PSG2P11465 335 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 SLC25A6P12236 298 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 MMP9P14780 707 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 EIF5AL1Q6IS14 154 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 GCSAMQ8N6F7 178 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR4C13Q8NGP0 309 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 MRPL30Q8TCC3 161 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 IL22RA2Q969J5 263 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 TOMM40LQ969M1 308 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 ISOC2Q96AB3 205 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 SNX22Q96L94 193 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 DCTN5Q9BTE1 182 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 SMIM3Q9BZL3 60 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 PARP12Q9H0J9 701 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 KCNIP3Q9Y2W7 256 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 AMMECR1Q9Y4X0 333 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 LSM5Q9Y4Y9 91 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 MAP1AP78559 2803 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 AGPAT2O15120 278 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 MDKP21741 143 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 ATP6V0CP27449 155 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 HTR1DP28221 377 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 ELOBQ15370 118 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 CXorf66Q5JRM2 361 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZNF506Q5JVG8 444 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 Q6ZRM9 215 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZNF561Q8N587 486 aa6.07□□□□□ -1.44
CDC42BPA-208ENST00000442054 SIGLECL1Q8N7X8 197 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms