RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 PGLYRP1O75594 196 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-206ENST00000441438 PGA3P0DJD8 388 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 CR2P20023 1033 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 PPIBP23284 216 aaKnown RBP8.69□□□□□ -1.02
SYNE2-206ENST00000441438 SDC2P34741 201 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 CDKN2AP42771 156 aaKnown RBP8.69□□□□□ -1.02
SYNE2-206ENST00000441438 PPP1CBP62140 327 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 RPS13P62277 151 aaKnown RBP8.69□□□□□ -1.02
SYNE2-206ENST00000441438 AKR1C1Q04828 323 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 ZNF730Q6ZMV8 503 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 PHYHIPLQ96FC7 376 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 TEX101Q9BY14 249 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 ISG20L2Q9H9L3 353 aaKnown RBP8.69□□□□□ -1.02
SYNE2-206ENST00000441438 ACKR4Q9NPB9 350 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 TXNL4BQ9NX01 149 aaKnown RBP8.69□□□□□ -1.02
SYNE2-206ENST00000441438 DSPPQ9NZW4 1301 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 NUMA1Q14980 2115 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 F5P12259 2224 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 FAM240AA0A1B0GVK7 77 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 SCTP09683 121 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 SPINK8P0C7L1 97 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 HMGA1P17096 107 aaKnown RBP8.69□□□□□ -1.02
SYNE2-206ENST00000441438 OR10J1P30954 320 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 GFI1BQ5VTD9 330 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 C20orf196Q8IYI0 205 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 OR8B12Q8NGG6 310 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 OR2A12Q8NGT7 310 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 JPT2Q9H910 190 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 FLVCR1Q9Y5Y0 555 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 NCKAP5O14513 1909 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 COL6A3P12111 3177 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 C1QL1O75973 258 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 MMP7P09237 267 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-206ENST00000441438 ZDHHC22Q8N966 263 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 OR4C12Q96R67 309 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 ZNF587Q96SQ5 575 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-206ENST00000441438 MYO10Q9HD67 2058 aa8.69□□□□□ -1.02
SYNE2-206ENST00000441438 NPFFO15130 113 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 UBE2NP61088 152 aaKnown RBP8.68□□□□□ -1.02
SYNE2-206ENST00000441438 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 SLC25A30Q5SVS4 291 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 IBA57Q5T440 356 aaKnown RBP8.68□□□□□ -1.02
SYNE2-206ENST00000441438 COX8CQ7Z4L0 72 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 CMTM4Q8IZR5 234 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 FTMTQ8N4E7 242 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 SPATA3Q8NHX4 192 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 EEF1AKMT3Q96AZ1 226 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 SLAMF6Q96DU3 332 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 C9orf85Q96MD7 179 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 DLL4Q9NR61 685 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 IGHV1-69-2A0A0G2JMI3 117 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 AQP1P29972 269 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 CD70P32970 193 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 C1DQ13901 141 aaKnown RBP8.68□□□□□ -1.02
SYNE2-206ENST00000441438 GPR26Q8NDV2 337 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 KLK6Q92876 244 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 MCHR1Q99705 422 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 GGTLC1Q9BX51 225 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 C2orf16Q68DN1 1984 aa8.68□□□□□ -1.02
SYNE2-206ENST00000441438 K7ENP7 123 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HLA-DQA2P01906 255 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 ZNF92Q03936 586 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 PLK5Q496M5 336 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 OR11H6Q8NGC7 330 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 SRSF12Q8WXF0 261 aaKnown RBP8.67□□□□□ -1.02
SYNE2-206ENST00000441438 SFXN3Q9BWM7 321 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 DNAJC27Q9NZQ0 273 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 VAX2Q9UIW0 290 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 ANAPC1Q9H1A4 1944 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 ODAMA1E959 279 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 RBFOX3A6NFN3 312 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 LINC01565O15544 149 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 BCL2L11O43521 198 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 NDUFB4O95168 129 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 CXorf1O96002 111 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 APOC4P55056 127 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HLA-DQA1Q5Y7H0 255 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 UFSP1Q6NVU6 142 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 BMFQ96LC9 184 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 FRG2BQ96QU4 278 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 SIGLEC7Q9Y286 467 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 MED31Q9Y3C7 131 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 OR2M5A3KFT3 312 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 H3BQ15 152 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 AGPAT2O15120 278 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST1H2BKO60814 126 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST1H2BJP06899 126 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST1H2BOP23527 126 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 TSPOP30536 169 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST1H2BBP33778 126 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST1H2BDP58876 126 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST1H2BCP62807 126 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST2H2BEQ16778 126 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.67□□□□□ -1.02
SYNE2-206ENST00000441438 ARPC1AQ92747 370 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST1H2BHQ93079 126 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 PLEKHB2Q96CS7 222 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 HIST1H2BNQ99877 126 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms