RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 HDHD3Q9BSH5 251 aaPredicted RBP9.63□□□□□ -0.87
SCN4A-201ENST00000435607 TRGV4A0A0C4DH28 118 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 NPIPB4C9JG80 1138 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 SEC11BP0C7V7 166 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 TMEM167AQ8TBQ9 72 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 AKIRIN1Q9H9L7 192 aaPredicted RBP9.63□□□□□ -0.87
SCN4A-201ENST00000435607 TAF1P21675 1872 aa9.63□□□□□ -0.87
SCN4A-201ENST00000435607 DUSP14O95147 198 aaKnown RBP9.62□□□□□ -0.87
SCN4A-201ENST00000435607 LAMA4Q16363 1823 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 LEPP41159 167 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 NPBWR2P48146 333 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 PPP1R27Q86WC6 154 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 ZIC4Q8N9L1 334 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 TMEM54Q969K7 222 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 SAXO1Q8IYX7 474 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 NPIPB8E9PQR5 432 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 NPIPB9F8W1W9 429 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 H3BQ15 152 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 TM4SF5O14894 197 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 NPIPB7O75200 414 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 HKR1P10072 659 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 HOXA5P20719 270 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 ERVK11-1P61568 191 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 KLF14Q8TD94 323 aaPredicted RBP9.62□□□□□ -0.87
SCN4A-201ENST00000435607 AICDAQ9GZX7 198 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 IFT22Q9H7X7 185 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 TRAV20A0A0B4J274 112 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 TSPAN2O60636 221 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 EIF3GO75821 320 aaKnown RBP eCLIP9.62□□□□□ -0.87
SCN4A-201ENST00000435607 OR8D4Q8NGM9 314 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 HMX2A2RU54 273 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 HLA-DRB1P01911 266 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 DMKNQ6E0U4 476 aaPredicted RBP9.62□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF488Q96MN9 340 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 GP6Q9HCN6 339 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 TMEM30AQ9NV96 361 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 COX5BP10606 129 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 RPS11P62280 158 aaKnown RBP eCLIP9.62□□□□□ -0.87
SCN4A-201ENST00000435607 ZPLD1Q8TCW7 415 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 RBKSQ9H477 322 aa9.62□□□□□ -0.87
SCN4A-201ENST00000435607 OR11H12B2RN74 326 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 FOLR2P14207 255 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 GLRXP35754 106 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 TMEM86BQ8N661 226 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 OR11H1Q8NG94 326 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 OR11H2Q8NH07 326 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 CKAP5Q14008 2032 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 ANKRD31Q8N7Z5 1873 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 C1QTNF12Q5T7M4 302 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 REG1AP05451 166 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 RIPPLY2Q5TAB7 128 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 ATP5LO75964 103 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 SMIM18P0DKX4 95 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 BCL2P10415 239 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 J3QW42 95 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 CD8AP01732 235 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 MGAT2Q10469 447 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 NSUN5P1Q3KNT7 163 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 OR11H4Q8NGC9 324 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 RNASE6Q93091 150 aaKnown RBP9.61□□□□□ -0.87
SCN4A-201ENST00000435607 AKIP1Q9NQ31 210 aa9.61□□□□□ -0.87
SCN4A-201ENST00000435607 C3orf56Q8N813 242 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 KCNS1Q96KK3 526 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 TMEM106BQ9NUM4 274 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 FBXL7Q9UJT9 491 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 CDC42EP2O14613 210 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 CEACAM8P31997 349 aaPredicted RBP9.6□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF324BQ6AW86 544 aaPredicted RBP9.6□□□□□ -0.87
SCN4A-201ENST00000435607 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 SPSB4Q96A44 273 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 C1QTNF9BB2RNN3 333 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 M0R381 172 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 NDUFB4O95168 129 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 ATP6V0CP27449 155 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 PI4KAP42356 2102 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 CD33P20138 364 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 SCARF2Q96GP6 870 aaPredicted RBP9.6□□□□□ -0.87
SCN4A-201ENST00000435607 PIKFYVEQ9Y2I7 2098 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 SCN8AQ9UQD0 1980 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 TDGF1P3P51864 188 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 ACSF3Q4G176 576 aaPredicted RBP9.6□□□□□ -0.87
SCN4A-201ENST00000435607 COLCA1Q6ZS62 124 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 GOLT1AQ6ZVE7 132 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 MYO16Q9Y6X6 1858 aa9.6□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF415Q09FC8 603 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 ZNF826PQ6ZT77 177 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 MS4A3Q96HJ5 214 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 PRADC1Q9BSG0 188 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 TRIOBPQ9H2D6 2365 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 PRR32B1ATL7 298 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 EFEMP2O95967 443 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 Q6ZT83 130 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 FLRT3Q9NZU0 649 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 NEUROG1Q92886 237 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 ZFC3H1O60293 1989 aaKnown RBP9.59□□□□□ -0.87
SCN4A-201ENST00000435607 TRBV9A0A0B4J1U6 114 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 IGKV1D-33P01593 117 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 IGKV1-33P01594 117 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 SNRPCP09234 159 aaKnown RBP9.59□□□□□ -0.87
SCN4A-201ENST00000435607 PKIAP61925 76 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms