RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	FAM215A	Q9Y5M1	114 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	LINC00587	B1AMM8	73 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	CD1B	P29016	333 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	KIR2DS2	P43631	304 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	GATA4	P43694	442 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	RELB	Q01201	579 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	BSX	Q3C1V8	233 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	RPL39P5	Q59GN2	51 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	MOGAT3	Q86VF5	341 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	FAM222B	Q8WU58	562 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	FRZB	Q92765	325 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	RAB1C	Q92928	201 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	CALY	Q9NYX4	217 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	MIOX	Q9UGB7	285 aa		13.3	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	SMCO3	A2RU48	225 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	MPDU1	O75352	247 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	TRGC1	P0CF51	173 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	CDC34	P49427	236 aa	Predicted RBP	13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	KLF3	P57682	345 aa	Predicted RBP	13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	TLE1	Q04724	770 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	ADIRF	Q15847	76 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	PRAMEF5	Q5TYX0	476 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	ZNRF1	Q8ND25	227 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	RPUSD4	Q96CM3	377 aa	Known RBP	13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	OTOGL	Q3ZCN5	2332 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145		M0R1B8	84 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	RPP30	P78346	268 aa	Known RBP	13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	C17orf58	Q2M2W7	97 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	C16orf82	Q7Z2V1	217 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	HIST3H2BB	Q8N257	126 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	OR4F5	Q8NH21	305 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	NEIL1	Q96FI4	390 aa	Predicted RBP	13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	OR4F4	Q96R69	305 aa		13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	GAR1	Q9NY12	217 aa	Known RBP	13.29	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	CACNA1H	O95180	2353 aa		13.28	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	GFRA3	O60609	400 aa		13.28	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	PAGE4	O60829	102 aa		13.28	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	IGHV2-70	P01814	119 aa		13.28	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	CRYAA	P02489	173 aa		13.28	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.28	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	OR4A16	Q8NH70	328 aa		13.28	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	ITLN1	Q8WWA0	313 aa		13.28	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	PLPPR2	Q96GM1	343 aa		13.28	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	SLC31A2	O15432	143 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	VENTX	O95231	258 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	SOD3	P08294	240 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	RAB7A	P51149	207 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	ERVK-16	P61578	105 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	PYY3	Q5JQD4	70 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	SSX9	Q7RTT3	188 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	OR51G1	Q8NGK1	321 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	TMEM170A	Q8WVE7	144 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	S1PR3	Q99500	378 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	SRD5A3	Q9H8P0	318 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	GFOD1	Q9NXC2	390 aa		13.27	□□□□□ -0.28
HLA-DQB2-231	ENST00000435145	DOCK11	Q5JSL3	2073 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TRAV3	A0A0B4J244	114 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TRGV8	A0A0C4DH27	118 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	RRH	O14718	337 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	PPP1R2P9	O14990	202 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	DEFA4	P12838	97 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	NPPC	P23582	126 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	OPRK1	P41145	380 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	UTF1	Q5T230	341 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TREML4	Q6UXN2	200 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145		Q6ZS92	163 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TGIF2LY	Q8IUE0	185 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	OR10A7	Q8NGE5	316 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	SDSL	Q96GA7	329 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TMEM140	Q9NV12	185 aa		13.27	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	PRRC2C	Q9Y520	2896 aa	Known RBP	13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	S100A2	P29034	98 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TIMP3	P35625	211 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	EDDM3B	P56851	147 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	CT45A1	Q5HYN5	189 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	C1orf185	Q5T7R7	199 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GFI1B	Q5VTD9	330 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	VKORC1L1	Q8N0U8	176 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	RPRML	Q8N4K4	120 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	OR4S2	Q8NH73	311 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	CT45A3	Q8NHU0	189 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	RAB9B	Q9NP90	201 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TCF19	Q9Y242	345 aa		13.26	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	SPRY3	O43610	288 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	IFNA10	P01566	189 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GCSAML	Q5JQS6	135 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	STUM	Q69YW2	141 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	FAM234A	Q9H0X4	552 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	LINC00574	Q9H8X3	128 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	HEYL	Q9NQ87	328 aa	Predicted RBP	13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	HEATR1	Q9H583	2144 aa	Known RBP	13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	C15orf61	A6NNL5	157 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	C11orf94	C9JXX5	98 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145		H7BYZ3	331 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	GYPA	P02724	150 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	SELL	P14151	372 aa		13.25	□□□□□ -0.29
HLA-DQB2-231	ENST00000435145	TCF23	Q7RTU1	214 aa		13.25	□□□□□ -0.29

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