RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 GJE1A6NN92 205 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 RRHO14718 337 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 CEBPDP49716 269 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 ASPHD1Q5U4P2 390 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 DOLPP1Q86YN1 238 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 AGBL5Q8NDL9 886 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 SF3B5Q9BWJ5 86 aaKnown RBP9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 CLEC1BQ9P126 229 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 A0A0G2JMM0 328 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 A0A1W2PPB8 328 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 A0A1W2PRS3 328 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 A0A1W2PS18 150 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 ZNF716A6NP11 495 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 RNF212BA8MTL3 300 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 KIR3DP1A8MWS1 328 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 MRPL33O75394 65 aaKnown RBP9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 ZNF83P51522 516 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 SSR4P51571 173 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 GFRA1P56159 465 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 TRIM61Q5EBN2 209 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 TCTEX1D1Q8N7M0 179 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 OR52L2PQ8NGH6 319 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 SPSB4Q96A44 273 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 PRDM14Q9GZV8 571 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 RNASE7Q9H1E1 156 aaKnown RBP9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 PROK2Q9HC23 129 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 YTHDF2Q9Y5A9 579 aaKnown RBP9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 EXPH5Q8NEV8 1989 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 COL5A1P20908 1838 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 DEFB108AA8MXU0 73 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 Q56UQ5 140 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 PRR31Q5SQ13 230 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 KLHDC1Q8N7A1 406 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 Q8N976 141 aa9.68□□□□□ -0.86
HMGCS1-202ENST00000433297 IGHV3-43A0A0B4J1X8 118 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 ACTL6BO94805 426 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 OR2H2O95918 312 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 RFPL3SP0C7P2 107 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 IGHV3-43DP0DP04 118 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 CTRLP40313 264 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 LGALS4P56470 323 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 ST6GALNAC6Q969X2 333 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 HOXA4Q00056 320 aaPredicted RBP9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 Q0VG73 95 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 RFESDQ8TAC1 157 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 GCM1Q9NP62 436 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 HEYLQ9NQ87 328 aaPredicted RBP9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 COX11Q9Y6N1 276 aa9.67□□□□□ -0.86
HMGCS1-202ENST00000433297 FOXH1O75593 365 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 DKK1O94907 266 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 MGST1P10620 155 aaKnown RBP9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 EN2P19622 333 aaPredicted RBP9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 TSPOP30536 169 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 NXPH1P58417 271 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 FBLN7Q53RD9 439 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 SYT13Q7L8C5 426 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 RPS19BP1Q86WX3 136 aaKnown RBP9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 SLC35D1Q9NTN3 355 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 TP73-AS1Q9UF72 201 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 ESDP10768 282 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 GNG3P63215 75 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 RELBQ01201 579 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 KRTAP27-1Q3LI81 207 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 SPATA31B1PQ5VZV4 182 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 STUMQ69YW2 141 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 NINJ1Q92982 152 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 LOXL4Q96JB6 756 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 KCNIP1Q9NZI2 227 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 LOC105371242A0A075B767 164 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 CXorf1O96002 111 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 IGLV3-19P01714 112 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 CATR1Q13166 79 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 TPRX1Q8N7U7 411 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 OR2M7Q8NG81 312 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
HMGCS1-202ENST00000433297 ZNF503-AS2A6NEH8 195 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 ITGB1BP1O14713 200 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 ZNF324O75467 553 aaPredicted RBP9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 NXPH2O95156 264 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 TFF1P04155 84 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 PQLC2Q6ZP29 291 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 OR4P4Q8NGL7 312 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 SEPSECSQ9HD40 501 aaKnown RBP9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 NEURL1O76050 574 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 CA1P00915 261 aaPredicted RBP9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 IGHV3-13P01766 116 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 IGHV3-7P01780 117 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 GRPP07492 148 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 CDKN1BP46527 198 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 PRRX1P54821 245 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 PCOLCEQ15113 449 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 VKORC1L1Q8N0U8 176 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 GALMQ96C23 342 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 GMPPAQ96IJ6 420 aaPredicted RBP9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 EAF1Q96JC9 268 aaPredicted RBP9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 WDR83OSQ9Y284 106 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 COL6A3P12111 3177 aa9.65□□□□□ -0.86
HMGCS1-202ENST00000433297 NBEAQ8NFP9 2946 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms