RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 OOSP1A8MZH6 123 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 KRASP01116 189 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 PSMB6P28072 239 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 G6PCP35575 357 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 LGALS4P56470 323 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 Q5BKY6 102 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 LDLRAD2Q5SZI1 272 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 OR8H3Q8N146 312 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 OR4D5Q8NGN0 318 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 WASHC3Q9Y3C0 194 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 AUP1Q9Y679 476 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 TRAV14DV4A0A0A6YYC5 116 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 MPC2O95563 127 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 HRASP01112 189 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 ARHGDIBP52566 201 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 ERVK-16P61578 105 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 SMCO1Q147U7 214 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 POU2AF1Q16633 256 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 PDZD9Q8IXQ8 264 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 OSR1Q8TAX0 266 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-206ENST00000431390 AIFM2Q9BRQ8 373 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 ZFP57Q9NU63 452 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 COA4Q9NYJ1 87 aa14.73□□□□□ -0.05
HMGN1-206ENST00000431390 A0A1W2PPI3 338 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 FAM90A9PA6NNJ1 464 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 H7C2Y5 167 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 J3QLI3 93 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 PITX3O75364 302 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 TMEM249Q2WGJ8 235 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 MIDNQ504T8 468 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 TMEM177Q53S58 311 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 CCDC144NLQ6NUI1 221 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 H2BFWTQ7Z2G1 175 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 OR4C13Q8NGP0 309 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 C7orf69Q9H7B7 122 aa14.72□□□□□ -0.05
HMGN1-206ENST00000431390 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.71□□□□□ -0.054e-11■■■■■ 27.5
HMGN1-206ENST00000431390 CENPVL3A0A0U1RRI6 287 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 IGKV1-16P04430 117 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 PET100P0DJ07 73 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 IGHV4-31P0DP07 118 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 SLC25A4P12235 298 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 RAB32Q13637 225 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 LRRC37A5PQ49AS3 106 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 C11orf87Q6NUJ2 197 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 LHFPL4Q7Z7J7 247 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 MAPK1IP1LQ8NDC0 245 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 DMBX1Q8NFW5 382 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 OR11H4Q8NGC9 324 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 FLYWCH2Q96CP2 140 aaKnown RBP14.71□□□□□ -0.05
HMGN1-206ENST00000431390 CACNG5Q9UF02 275 aa14.71□□□□□ -0.05
HMGN1-206ENST00000431390 COL6A5A8TX70 2615 aa14.71□□□□□ -0.06
HMGN1-206ENST00000431390 A0A1W2PRD5 423 aa14.7□□□□□ -0.06
HMGN1-206ENST00000431390 A0A1W2PRF3 423 aa14.7□□□□□ -0.06
HMGN1-206ENST00000431390 A0A1W2PRM7 423 aa14.7□□□□□ -0.06
HMGN1-206ENST00000431390 HABP2Q14520 560 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-206ENST00000431390 Q6ZRM9 215 aa14.7□□□□□ -0.06
HMGN1-206ENST00000431390 MOB3BQ86TA1 216 aa14.7□□□□□ -0.06
HMGN1-206ENST00000431390 THAP6Q8TBB0 222 aa14.7□□□□□ -0.06
HMGN1-206ENST00000431390 MALSU1Q96EH3 234 aa14.7□□□□□ -0.06
HMGN1-206ENST00000431390 HMSDA8MTL9 139 aa14.69□□□□□ -0.06
HMGN1-206ENST00000431390 NPFFO15130 113 aa14.69□□□□□ -0.06
HMGN1-206ENST00000431390 MBPP02686 304 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-206ENST00000431390 NKX2-1P43699 371 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-206ENST00000431390 OR1S1Q8NH92 325 aa14.69□□□□□ -0.06
HMGN1-206ENST00000431390 RHOVQ96L33 236 aa14.69□□□□□ -0.06
HMGN1-206ENST00000431390 IGHV1-69DA0A0B4J2H0 117 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 SHOXO15266 292 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 ST8SIA3O43173 380 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 CRLF1O75462 422 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 SNAPC5O75971 98 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 SCGB1D2O95969 90 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 TGFAP01135 160 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 IGHV1-69P01742 117 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 LYL1P12980 280 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 CD1BP29016 333 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 NKX2-5P52952 324 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-206ENST00000431390 S100A10P60903 97 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 ID3Q02535 119 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 IZUMO4Q1ZYL8 232 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 PRSS54Q6PEW0 395 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 HARBI1Q96MB7 349 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-206ENST00000431390 TMEM140Q9NV12 185 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 HILPDAQ9Y5L2 63 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 POMT1Q9Y6A1 747 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 ANK3Q12955 4377 aaKnown RBP14.68□□□□□ -0.06
HMGN1-206ENST00000431390 FXYD6-FXYD2A0A087WZ82 144 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 TRAV40A0A0B4J280 105 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 FAM90A26D6RGX4 464 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 K7EPK0 472 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 TIMM23O14925 209 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 RLN2P04090 185 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 SAA4P35542 130 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 KRTAP1-1Q07627 177 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 GPR157Q5UAW9 335 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 TMEM65Q6PI78 240 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 SSX9Q7RTT3 188 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 FAM71E2Q8N5Q1 922 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 CFHR4Q92496 578 aa14.68□□□□□ -0.06
HMGN1-206ENST00000431390 RNF5Q99942 180 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms