RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 HAPLN4Q86UW8 402 aa13.66□□□□□ -0.22
USHBP1-203ENST00000431146 GAB2Q9UQC2 676 aa13.66□□□□□ -0.22
USHBP1-203ENST00000431146 TRAV3A0A0B4J244 114 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 FAM90A26D6RGX4 464 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 IGHV2-70P01814 119 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 H2AFB1P0C5Y9 115 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 SEC11BP0C7V7 166 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 DAOP14920 347 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 ATP6V0CP27449 155 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 PRB3Q04118 309 aaPredicted RBP13.65□□□□□ -0.22
USHBP1-203ENST00000431146 C11orf71Q6IPW1 123 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 Q6ZRG5 221 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 STPG2Q8N412 459 aa13.65□□□□□ -0.22
USHBP1-203ENST00000431146 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
USHBP1-203ENST00000431146 ARHGAP32A7KAX9 2087 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 PLA2G5P39877 138 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 SRSF3P84103 164 aaKnown RBP13.64□□□□□ -0.23
USHBP1-203ENST00000431146 EIF4E3Q8N5X7 224 aaKnown RBP13.64□□□□□ -0.23
USHBP1-203ENST00000431146 ATP5SQ99766 215 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 RAB1BQ9H0U4 201 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 TUSC1Q2TAM9 212 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 OR8G2PQ6IF36 304 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 DTD1Q8TEA8 209 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 SAT2Q96F10 170 aaPredicted RBP13.64□□□□□ -0.23
USHBP1-203ENST00000431146 BIN3Q9NQY0 253 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 CBY1Q9Y3M2 126 aa13.64□□□□□ -0.23
USHBP1-203ENST00000431146 AGPAT2O15120 278 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 RBFOX2O43251 390 aaKnown RBP eCLIP13.63□□□□□ -0.23
USHBP1-203ENST00000431146 DANCRP0C864 163 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 CT45A6P0DMU7 189 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 CT45A5P0DMU8 189 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 CT45A7P0DMV0 189 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 NQO2P16083 231 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 S100PP25815 95 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 REG1BP48304 166 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 THBS3P49746 956 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 DLX6P56179 175 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 ERVK-16P61578 105 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 TMEM30BQ3MIR4 351 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 TMEM155Q4W5P6 130 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 NARS2Q96I59 477 aaKnown RBP13.63□□□□□ -0.23
USHBP1-203ENST00000431146 OR4C12Q96R67 309 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 TMEM140Q9NV12 185 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 CEBPZOSA8MTT3 80 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 KIR2DS2P43631 304 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 ZNF616Q08AN1 781 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 DIAPH2-AS1Q14236 149 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 ZNF841Q6ZN19 808 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 BPIFCQ8NFQ6 507 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 OR10A7Q8NGE5 316 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 OR2G3Q8NGZ4 309 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 TMEM231Q9H6L2 316 aa13.63□□□□□ -0.23
USHBP1-203ENST00000431146 F12P00748 615 aaPredicted RBP13.62□□□□□ -0.23
USHBP1-203ENST00000431146 IFNA17P01571 189 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 PRH1P02810 166 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 IGKV1-16P04430 117 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 CDKN1AP38936 164 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 TAS2R30P59541 319 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 OR4A16Q8NH70 328 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 OR51M1Q9H341 326 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 UBTD1Q9HAC8 227 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 MMP26Q9NRE1 261 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 CACFD1Q9UGQ2 172 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 TNCP24821 2201 aa13.62□□□□□ -0.23
USHBP1-203ENST00000431146 PPIHO43447 177 aaKnown RBP13.61□□□□□ -0.23
USHBP1-203ENST00000431146 CAMLGP49069 296 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 SLC25A24Q6NUK1 477 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 C11orf42Q8N5U0 333 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 RHOVQ96L33 236 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 MRPL20Q9BYC9 149 aaKnown RBP13.61□□□□□ -0.23
USHBP1-203ENST00000431146 A0A1B0GV50 99 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 TMEM238LA0A1B0GVL6 79 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 BLOC1S1P78537 153 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 RELBQ01201 579 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 BTNL8Q6UX41 500 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 TMEM14EPQ6UXP3 125 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 ZNF525Q8N782 197 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 OR10X1Q8NGY0 326 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 PARP11Q9NR21 331 aa13.61□□□□□ -0.23
USHBP1-203ENST00000431146 J3QR06 171 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 NDUFS7O75251 213 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 IGHV1-8P0DP01 117 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 HNF4GQ14541 408 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 ZNF833PQ6ZTB9 187 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 THNSL2Q86YJ6 484 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 FAM213BQ8TBF2 198 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 ADTRPQ96IZ2 230 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 RSG1Q9BU20 258 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 SLC35D1Q9NTN3 355 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 FAM96BQ9Y3D0 163 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 DFFBO76075 338 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 S100A8P05109 93 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 MYOD1P15172 320 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 SLC38A11Q08AI6 406 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 PJVKQ0ZLH3 352 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 OR4A47Q6IF82 309 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 FBXO7Q9Y3I1 522 aa13.6□□□□□ -0.23
USHBP1-203ENST00000431146 SRRM4A7MD48 611 aaKnown RBP13.59□□□□□ -0.23
USHBP1-203ENST00000431146 H7C2Y5 167 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms