RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ZNF146Q15072 292 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 BSXQ3C1V8 233 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 DPPA3Q6W0C5 159 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 MRGPRGQ86SM5 289 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 MOB3BQ86TA1 216 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 TGIF2LYQ8IUE0 185 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 OR10A7Q8NGE5 316 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 KLF14Q8TD94 323 aaPredicted RBP5.96□□□□□ -1.46
COL28A1-202ENST00000430711 ZCCHC14Q8WYQ9 949 aaKnown RBP5.96□□□□□ -1.46
COL28A1-202ENST00000430711 AGMATQ9BSE5 352 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 UNKLQ9H9P5 680 aaKnown RBP5.96□□□□□ -1.46
COL28A1-202ENST00000430711 WASF3Q9UPY6 502 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 PLCE1Q9P212 2302 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 XKRY2A2RUG3 117 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 LRP5LA4QPB2 252 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 TM4SF5O14894 197 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 CLDN14O95500 239 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 DDTP30046 118 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 THBS3P49746 956 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 FABP6P51161 128 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 ARG2P78540 354 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 TDRG1Q3Y452 100 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 WDR82Q6UXN9 313 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 MCEMP1Q8IX19 187 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 ZNF645Q8N7E2 425 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 OR1P1Q8NH06 330 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 DTD1Q8TEA8 209 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 SDSLQ96GA7 329 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 PYGO2Q9BRQ0 406 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 ATG101Q9BSB4 218 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 RTL8AQ9BWD3 113 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 GPR87Q9BY21 358 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 LIN7CQ9NUP9 197 aaKnown RBP5.96□□□□□ -1.46
COL28A1-202ENST00000430711 NAT8Q9UHE5 227 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 A0A087X0M5 115 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 A0A0U1RQK1 487 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 A0A1B0GX30 115 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 GRIFINA4D1Z8 144 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 FOXH1O75593 365 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 IL3RAP26951 378 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 LINC00310P59036 64 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 DEFA6Q01524 100 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 TMEM241Q24JQ0 296 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 HLA-DRB5Q30154 266 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 FAM78BQ5VT40 261 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 ZNF66Q6ZN08 573 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 ABHD12Q8N2K0 398 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 OR13D1Q8NGV5 346 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 SNRNP40Q96DI7 357 aaKnown RBP5.95□□□□□ -1.46
COL28A1-202ENST00000430711 IMMP2LQ96T52 175 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 STRADBQ9C0K7 418 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 RIMS4Q9H426 269 aaPredicted RBP5.95□□□□□ -1.46
COL28A1-202ENST00000430711 HES4Q9HCC6 221 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 OBP2BQ9NPH6 170 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 TP53TG3Q9ULZ0 132 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 YLPM1P49750 1951 aaKnown RBP5.95□□□□□ -1.46
COL28A1-202ENST00000430711 DSCAML1Q8TD84 2053 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 CNOT1A5YKK6 2376 aaKnown RBP5.95□□□□□ -1.46
COL28A1-202ENST00000430711 PIEZO2Q9H5I5 2752 aa5.95□□□□□ -1.46
COL28A1-202ENST00000430711 SCO2A0A1W2PP80 73 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 CDX4O14627 284 aaPredicted RBP5.94□□□□□ -1.46
COL28A1-202ENST00000430711 SIAH2O43255 324 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 NDUFB4O95168 129 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 IGHEP01854 428 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 WNT2P09544 360 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 CD59P13987 128 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 PAX1P15863 534 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 GCH1P30793 250 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 HOXA6P31267 233 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 DUSP3P51452 185 aaPredicted RBP5.94□□□□□ -1.46
COL28A1-202ENST00000430711 HBG1P69891 147 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 HBG2P69892 147 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 MIC13Q5XKP0 118 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 TEX38Q6PEX7 206 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 ACP7Q6ZNF0 438 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 LINC00596Q86U02 117 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 TMEM183AQ8IXX5 376 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 RPRMLQ8N4K4 120 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 WDR31Q8NA23 367 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 SSMEM1Q8WWF3 244 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 SRD5A3Q9H8P0 318 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 NAV3Q8IVL0 2385 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 PLXNB1O43157 2135 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 MARCH11A6NNE9 402 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 ZNF705GA8MUZ8 300 aaPredicted RBP5.94□□□□□ -1.46
COL28A1-202ENST00000430711 B4DEV8 164 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 C11orf94C9JXX5 98 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 C15orf65H3BRN8 121 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 H7BYZ3 331 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 RBMXL2O75526 392 aaKnown RBP5.94□□□□□ -1.46
COL28A1-202ENST00000430711 SERF2P84101 59 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 TRIP6Q15654 476 aaKnown RBP5.94□□□□□ -1.46
COL28A1-202ENST00000430711 GABRA6Q16445 453 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 TBC1D28Q2M2D7 210 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 ACTL10Q5JWF8 245 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 CENPVQ7Z7K6 275 aaPredicted RBP5.94□□□□□ -1.46
COL28A1-202ENST00000430711 LINC01551Q86U37 167 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 CNEP1R1Q8N9A8 125 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 C9orf106Q8NAJ2 232 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 ZNRF1Q8ND25 227 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms