RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 KCTD9Q7L273 389 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 ZNF645Q8N7E2 425 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 GVQW1Q8N7I0 195 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 OR6Q1Q8NGQ2 317 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 CENPOQ9BU64 300 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 ST6GALNAC5Q9BVH7 336 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 AKIP1Q9NQ31 210 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 RHBDL2Q9NX52 303 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 COA4Q9NYJ1 87 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 RRP15Q9Y3B9 282 aaKnown RBP8.97□□□□□ -0.97
HDAC4-202ENST00000430200 DMRT1Q9Y5R6 373 aa8.97□□□□□ -0.97
HDAC4-202ENST00000430200 C13orf42A0A1B0GVH6 325 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 HMX3A6NHT5 357 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 CGB1A6NKQ9 187 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 FCGR3BO75015 233 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 BRI3O95415 125 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 HLA-DQB1P01920 261 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 FCER2P06734 321 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 CSN3P07498 182 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 ZNF773Q6PK81 442 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 OR9G4Q8NGQ1 327 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 ACOT12Q8WYK0 555 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 RBMX2Q9Y388 322 aaKnown RBP8.96□□□□□ -0.98
HDAC4-202ENST00000430200 OR2W1Q9Y3N9 320 aa8.96□□□□□ -0.98
HDAC4-202ENST00000430200 RBM7Q9Y580 266 aaKnown RBP8.96□□□□□ -0.98
HDAC4-202ENST00000430200 TRBV9A0A0B4J1U6 114 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 METTL21EPA6NDL7 271 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 MRPS14O60783 128 aaKnown RBP8.95□□□□□ -0.98
HDAC4-202ENST00000430200 OR9G9P0C7N8 305 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 TALDO1P37837 337 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 RHOGP84095 191 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 EXOSC2Q13868 293 aaKnown RBP8.95□□□□□ -0.98
HDAC4-202ENST00000430200 CDK10Q15131 360 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 VMA21Q3ZAQ7 101 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 TEX45Q8NA69 505 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 OSR1Q8TAX0 266 aaPredicted RBP8.95□□□□□ -0.98
HDAC4-202ENST00000430200 SNAPC3Q92966 411 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 OR4C12Q96R67 309 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 PHB2Q99623 299 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 TM2D3Q9BRN9 247 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 RANGRFQ9HD47 186 aaPredicted RBP8.95□□□□□ -0.98
HDAC4-202ENST00000430200 C19orf73Q9NVV2 129 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 ANXA10Q9UJ72 324 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 SELENOKQ9Y6D0 94 aa8.95□□□□□ -0.98
HDAC4-202ENST00000430200 ALMS1Q8TCU4 4167 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 PPP5D1E7EU14 171 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 HLA-AP01891 365 aaKnown RBP8.94□□□□□ -0.98
HDAC4-202ENST00000430200 IL6RP08887 468 aaPredicted RBP8.94□□□□□ -0.98
HDAC4-202ENST00000430200 RRASP10301 218 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 AREGP15514 252 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 ZP3P21754 424 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 AADACP22760 399 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 NEDD8Q15843 81 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 PUSL1Q8N0Z8 303 aaKnown RBP8.94□□□□□ -0.98
HDAC4-202ENST00000430200 FCGR1BQ92637 280 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 ADTRPQ96IZ2 230 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 CCDC140Q96MF4 163 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 WFDC10AQ9H1F0 79 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 TAS2R8Q9NYW2 309 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 PEF1Q9UBV8 284 aaKnown RBP8.94□□□□□ -0.98
HDAC4-202ENST00000430200 SPATA2Q9UM82 520 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 S4R3C0 116 aa8.94□□□□□ -0.98
HDAC4-202ENST00000430200 LOC100506127A0A0U1RQW1 187 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 MEIS3P1A6NDR6 274 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 TNFSF12O43508 249 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 OR2J3O76001 311 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 KBTBD11O94819 623 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 MECP2P51608 486 aaKnown RBP8.93□□□□□ -0.98
HDAC4-202ENST00000430200 GNG2P59768 71 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 CASC10Q5T4H9 136 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 CNIH2Q6PI25 160 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 MUC7Q8TAX7 377 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 TCTEX1D2Q8WW35 142 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 DCSTAMPQ9H295 470 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 RETNQ9HD89 108 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 CCL28Q9NRJ3 127 aa8.93□□□□□ -0.98
HDAC4-202ENST00000430200 TRAV18A0A075B6X5 111 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 A0A0G2JLM5 398 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 IGHV3-23P01764 117 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 CD40LGP29965 261 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 CBX3Q13185 183 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 TPRA1Q86W33 373 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 ANKRD13BQ86YJ7 626 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 BEST4Q8NFU0 473 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 OR13F1Q8NGS4 319 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 TMEM167AQ8TBQ9 72 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 CACNG8Q8WXS5 425 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 FANCD2OSQ96PS1 177 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 EDA2RQ9HAV5 297 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 SSR3Q9UNL2 185 aa8.92□□□□□ -0.98
HDAC4-202ENST00000430200 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.91□□□□□ -0.98
HDAC4-202ENST00000430200 TRAV3A0A0B4J244 114 aa8.91□□□□□ -0.98
HDAC4-202ENST00000430200 A8MZ25 164 aa8.91□□□□□ -0.98
HDAC4-202ENST00000430200 MPPED1O15442 326 aa8.91□□□□□ -0.98
HDAC4-202ENST00000430200 REG1AP05451 166 aa8.91□□□□□ -0.98
HDAC4-202ENST00000430200 ZNF735P0CB33 412 aa8.91□□□□□ -0.98
HDAC4-202ENST00000430200 CD36P16671 472 aa8.91□□□□□ -0.98
HDAC4-202ENST00000430200 RPEL1Q2QD12 228 aa8.91□□□□□ -0.98
HDAC4-202ENST00000430200 C15orf32Q32M92 178 aa8.91□□□□□ -0.98
HDAC4-202ENST00000430200 TIMM50Q3ZCQ8 353 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms