RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZNF66Q6ZN08 573 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 PDPNQ86YL7 162 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 OR13C8Q8NGS7 320 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 CHPT1Q8WUD6 406 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 TCTEX1D2Q8WW35 142 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 DUX3Q96PT4 197 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 MCUBQ9NWR8 336 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 SLC2A8Q9NY64 477 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 GPR31O00270 319 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 PGLYRP1O75594 196 aaPredicted RBP13.28□□□□□ -0.28
UBE3D-204ENST00000430071 PGAM2P15259 253 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 PI3P19957 117 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 MMDQ15546 238 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 RTL8BQ17RB0 113 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 LPCAT3Q6P1A2 487 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 C8orf86Q6ZUL3 223 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 SLC38A6Q8IZM9 456 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 FAM71E2Q8N5Q1 922 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 OR8H1Q8NGG4 311 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 MARCH1Q8TCQ1 289 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 BORCS5Q969J3 196 aa13.28□□□□□ -0.28
UBE3D-204ENST00000430071 LIN7CQ9NUP9 197 aaKnown RBP13.28□□□□□ -0.28
UBE3D-204ENST00000430071 TNCP24821 2201 aa13.27□□□□□ -0.28
UBE3D-204ENST00000430071 LINC00854A0A1B0GVQ3 168 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 FCGR3BO75015 233 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 CRYZL1O95825 349 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 RLN1P04808 185 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 FAUP35544 74 aaKnown RBP13.27□□□□□ -0.29
UBE3D-204ENST00000430071 KRTAP10-11P60412 298 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 RPS16P62249 146 aaKnown RBP13.27□□□□□ -0.29
UBE3D-204ENST00000430071 TMEM177Q53S58 311 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 IDO2Q6ZQW0 420 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 MRPL41Q8IXM3 137 aaKnown RBP13.27□□□□□ -0.29
UBE3D-204ENST00000430071 LINC00482Q8N8I6 264 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 NPBQ8NG41 125 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 OR51H1Q8NH63 302 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 FLYWCH2Q96CP2 140 aaKnown RBP13.27□□□□□ -0.29
UBE3D-204ENST00000430071 PRRT1Q99946 306 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 PRELID3BQ9Y3B1 194 aa13.27□□□□□ -0.29
UBE3D-204ENST00000430071 NBR2O15453 112 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 NDUFA3O95167 84 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 RPLP1P05386 114 aaKnown RBP13.26□□□□□ -0.29
UBE3D-204ENST00000430071 RRASP10301 218 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 INPP1P49441 399 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 ZNF846Q147U1 533 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 PSG5Q15238 335 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 CMTM1Q8IZ96 169 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 MRAPQ8TCY5 172 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 DEDD2Q8WXF8 326 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 RNF5Q99942 180 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 CCDC32Q9BV29 185 aa13.26□□□□□ -0.29
UBE3D-204ENST00000430071 SORL1Q92673 2214 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 SRRM4A7MD48 611 aaKnown RBP13.25□□□□□ -0.29
UBE3D-204ENST00000430071 AP4M1O00189 453 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 RAMP3O60896 148 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 IGLV2-23P01705 113 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 CD40LGP29965 261 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 HOXD3P31249 432 aaPredicted RBP13.25□□□□□ -0.29
UBE3D-204ENST00000430071 CATR1Q13166 79 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 C5orf64Q2M2E5 130 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 FOXRED2Q8IWF2 684 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 SPAG16Q8N0X2 631 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 KLHL30-AS1Q8NEE0 82 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 RASL11BQ9BPW5 248 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 WDR12Q9GZL7 423 aaKnown RBP13.25□□□□□ -0.29
UBE3D-204ENST00000430071 FBXL15Q9H469 300 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 SLC2A9Q9NRM0 540 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 SCP2D1Q9UJQ7 156 aa13.25□□□□□ -0.29
UBE3D-204ENST00000430071 RRHO14718 337 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 PLA2G10O15496 165 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 CTSDP07339 412 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-204ENST00000430071 RND3P61587 244 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 CFHR3Q02985 330 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 CBX3Q13185 183 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 DEFB136Q30KP8 78 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 TBC1D26Q86UD7 250 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 OR4S2Q8NH73 311 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 ZFAND1Q8TCF1 268 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 ZNF486Q96H40 463 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-204ENST00000430071 HARBI1Q96MB7 349 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 TSNAXQ99598 290 aaKnown RBP13.24□□□□□ -0.29
UBE3D-204ENST00000430071 RTBDNQ9BSG5 229 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-204ENST00000430071 GPR132Q9UNW8 380 aa13.24□□□□□ -0.29
UBE3D-204ENST00000430071 NUDT19A8MXV4 375 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 K7EIL1 84 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 SHOXO15266 292 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 RBFOX2O43251 390 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBE3D-204ENST00000430071 SLC25A17O43808 307 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 F2RP25116 425 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 ECI1P42126 302 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 KIR2DS2P43631 304 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 LGALS7P47929 136 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 PIGPP57054 158 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 SURF2Q15527 256 aaPredicted RBP13.23□□□□□ -0.29
UBE3D-204ENST00000430071 OSR1Q8TAX0 266 aaPredicted RBP13.23□□□□□ -0.29
UBE3D-204ENST00000430071 RAX2Q96IS3 184 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 P2RX4Q99571 388 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 C5orf66Q9H5L9 145 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 TPSG1Q9NRR2 321 aa13.23□□□□□ -0.29
UBE3D-204ENST00000430071 KIAA1456Q9P272 454 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms