RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 Q8N7P7 452 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 LURAP1Q96LR2 239 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 WFIKKN1Q96NZ8 548 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 KCNIP2Q9NS61 270 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 WDR83OSQ9Y284 106 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 A0A1W2PPV4 95 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 IQCF6A8MYZ5 107 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 EDDM3BP56851 147 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 PSG7Q13046 419 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 DCAF10Q5QP82 559 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 ZNF826PQ6ZT77 177 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 COQ2Q96H96 371 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 BTF3L4Q96K17 158 aa12.53□□□□□ -0.4
LINC00839-202ENST00000429940 QTRT1Q9BXR0 403 aaKnown RBP12.53□□□□□ -0.4
LINC00839-202ENST00000429940 IGHV3-43A0A0B4J1X8 118 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 TFF1P04155 84 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 SP1P08047 785 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 C1QTNF9P0C862 333 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 IGHV3-43DP0DP04 118 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 CD82P27701 267 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 TMEM164Q5U3C3 297 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 Q6ZR03 302 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 TMEM144Q7Z5S9 345 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 TGIF2LXQ8IUE1 241 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 DEFB127Q9H1M4 99 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 DOCK7Q96N67 2140 aa12.52□□□□□ -0.41
LINC00839-202ENST00000429940 PGPEP1LA6NFU8 196 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 F6UZH7 168 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 SSTR5P35346 364 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 UBE2NP61088 152 aaKnown RBP12.51□□□□□ -0.41
LINC00839-202ENST00000429940 RAB1CQ92928 201 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 IMMP2LQ96T52 175 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 HSD17B10Q99714 261 aaKnown RBP12.51□□□□□ -0.41
LINC00839-202ENST00000429940 PSG11Q9UQ72 335 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 DEFB108AA8MXU0 73 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 IFNL4K9M1U5 179 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 SCGB1D1O95968 90 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 FOSL1P15407 271 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 MPV17P39210 176 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 TMEM249Q2WGJ8 235 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 TPRX1Q8N7U7 411 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 ZNF114Q8NC26 417 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 R3HDM4Q96D70 268 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 SFRP2Q96HF1 295 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 FKBP11Q9NYL4 201 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 KLF13Q9Y2Y9 288 aaPredicted RBP12.51□□□□□ -0.41
LINC00839-202ENST00000429940 PXMP4Q9Y6I8 212 aa12.51□□□□□ -0.41
LINC00839-202ENST00000429940 EREGO14944 169 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 FOXL1Q12952 345 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 RFESDQ8TAC1 157 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 PATZ1Q9HBE1 687 aaKnown RBP12.5□□□□□ -0.41
LINC00839-202ENST00000429940 DNAJC13O75165 2243 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 MED13Q9UHV7 2174 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 DOCK11Q5JSL3 2073 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 MDFIC2A0A1B0GVS7 189 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 KLRC4-KLRK1H3BQV0 150 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 OR9G9P0C7N8 305 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 SPCS3P61009 180 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 ACP7Q6ZNF0 438 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 C11orf53Q8IXP5 236 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 TMEM256Q8N2U0 113 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 WDR31Q8NA23 367 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 OR13A1Q8NGR1 328 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 SGMS2Q8NHU3 365 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 KLF14Q8TD94 323 aaPredicted RBP12.5□□□□□ -0.41
LINC00839-202ENST00000429940 SDSLQ96GA7 329 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 IL17BQ9UHF5 180 aa12.5□□□□□ -0.41
LINC00839-202ENST00000429940 SPENQ96T58 3664 aaKnown RBP12.5□□□□□ -0.41
LINC00839-202ENST00000429940 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.49□□□□□ -0.41
LINC00839-202ENST00000429940 A0A1B0GUS0 222 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 GCH1P30793 250 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 TEX38Q6PEX7 206 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 ELOVL5Q9NYP7 299 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 TCAPO15273 167 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 RBFOX2O43251 390 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00839-202ENST00000429940 SOX15O60248 233 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 GFRA3O60609 400 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 MPDU1O75352 247 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 LYZL6O75951 148 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 ARL14EPLP0DKL9 152 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 PRR7Q8TB68 274 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 SPRR3Q9UBC9 169 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
LINC00839-202ENST00000429940 TRBV20OR9-2A0A075B6H5 130 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 IGHV1-2P23083 117 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 OPRK1P41145 380 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 RAB4BP61018 213 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 NUTF2P61970 127 aaKnown RBP12.48□□□□□ -0.41
LINC00839-202ENST00000429940 RPP30P78346 268 aaKnown RBP12.48□□□□□ -0.41
LINC00839-202ENST00000429940 TGFBR3Q03167 851 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 FOXF2Q12947 444 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 SRSF6Q13247 344 aaKnown RBP12.48□□□□□ -0.41
LINC00839-202ENST00000429940 ATMQ13315 3056 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 LTC4SQ16873 150 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 PRAMEF6Q5VXH4 476 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 TCF23Q7RTU1 214 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 MDS2Q8NDY4 140 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 USF3Q68DE3 2245 aa12.48□□□□□ -0.41
LINC00839-202ENST00000429940 TRGV5A0A0B4J1U4 118 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms