RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 NEURL1O76050 574 aa6.52□□□□□ -1.37
SYNPO2-202ENST00000429713 PPYP01298 95 aa6.52□□□□□ -1.37
SYNPO2-202ENST00000429713 RPS15P62841 145 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-202ENST00000429713 ATOH7Q8N100 152 aa6.52□□□□□ -1.37
SYNPO2-202ENST00000429713 OSR2Q8N2R0 312 aa6.52□□□□□ -1.37
SYNPO2-202ENST00000429713 CCL4L1Q8NHW4 92 aa6.52□□□□□ -1.37
SYNPO2-202ENST00000429713 J3QRE1 110 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 P01737 135 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 CDKN3Q16667 212 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 SAA2-SAA4A0A096LPE2 208 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 SCRG1O75711 98 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 CST7O76096 145 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 CEACAM5P06731 702 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 TMEM215Q68D42 235 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 ERVK11-1P61568 191 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 SSBP3Q9BWW4 388 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 TMEM252Q8N6L7 170 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 OR2T6Q8NHC8 308 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 SLC25A28Q96A46 364 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 A0A1B0GWB2 263 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 ALOX12BO75342 701 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 GHRHP01286 108 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 NR0B2Q15466 257 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 MLF2Q15773 248 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 RPEQ96AT9 228 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 ARHGAP5-AS1Q96IT6 56 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 M0R135 149 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 SSR4P51571 173 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 SPANXN5Q5MJ07 72 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 ZNF502Q8TBZ5 544 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 ZNF799Q96GE5 643 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 IGHV2-26A0A0B4J1V2 119 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 SP9P0CG40 484 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 WNT5AP41221 380 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 LCNL1Q6ZST4 164 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 GVQW1Q8N7I0 195 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 OR10D3Q8NH80 312 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 COX14Q96I36 57 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 PYGO2Q9BRQ0 406 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 C6orf106Q9H6K1 298 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 TMEM56-RWDD3S4R434 201 aa6.51□□□□□ -1.37
SYNPO2-202ENST00000429713 PRKNO60260 465 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 MRPL33O75394 65 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 KLK2P20151 261 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 CEACAM16Q2WEN9 425 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 PDPNQ86YL7 162 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 RBMXL3Q8N7X1 1067 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SIGLEC8Q9NYZ4 499 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 NBEAP1P0C6P0 100 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SAMD5Q5TGI4 173 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 ABHD17BQ5VST6 288 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SLC25A48Q6ZT89 311 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 D2HGDHQ8N465 521 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 OR13H1Q8NG92 308 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 GALMQ96C23 342 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 GPR27Q9NS67 375 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SERF1AO75920 110 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 TAF15Q92804 592 aaKnown RBP eCLIP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 VN1R1Q9GZP7 353 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 PXMP4Q9Y6I8 212 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 FCER1GP30273 86 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 MLF1P58340 268 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 KISS1Q15726 138 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SRSF10O75494 262 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SP1P08047 785 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 IGLC2P0DOY2 106 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 IGLC3P0DOY3 106 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 ERHP84090 104 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 FAM89BQ8N5H3 189 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 THOC3Q96J01 351 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SGK494Q96LW2 274 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 DIRC2Q96SL1 478 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 MED29Q9NX70 200 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 PTPN13Q12923 2485 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 S1PR3Q99500 378 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 C1RLQ9NZP8 487 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 LRRC30A6NM36 301 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 NTN1O95631 604 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 UCP1P25874 307 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 LHFPL4Q7Z7J7 247 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 CALHM1Q8IU99 346 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 RNF166Q96A37 237 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 CITED1Q99966 193 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 MRPL13Q9BYD1 178 aaKnown RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 AAMDCQ9H7C9 122 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 OBP2AQ9NY56 170 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SERGEFQ9UGK8 458 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SRIP30626 198 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 OR3A4PP47883 348 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 SCGB1D4Q6XE38 83 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 MRAPQ8TCY5 172 aa6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 BOKQ9UMX3 212 aaPredicted RBP6.5□□□□□ -1.37
SYNPO2-202ENST00000429713 PGPEP1LA6NFU8 196 aa6.49□□□□□ -1.37
SYNPO2-202ENST00000429713 CDAP32320 146 aa6.49□□□□□ -1.37
SYNPO2-202ENST00000429713 MMDQ15546 238 aa6.49□□□□□ -1.37
SYNPO2-202ENST00000429713 CLEC12BQ2HXU8 276 aa6.49□□□□□ -1.37
SYNPO2-202ENST00000429713 TBC1D28Q2M2D7 210 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms