RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 PUSL1Q8N0Z8 303 aaKnown RBP8.53□□□□□ -1.04
HDAC9-210ENST00000428307 SFT2D1Q8WV19 159 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 GAB2Q9UQC2 676 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 IGKV1-16P04430 117 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 CT45A6P0DMU7 189 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 CT45A5P0DMU8 189 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 CT45A7P0DMV0 189 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 SFTPCP11686 197 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 LOXP28300 417 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-210ENST00000428307 THBS3P49746 956 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 GUK1Q16774 197 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-210ENST00000428307 OR10P1Q8NGE3 313 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 VSIRQ9H7M9 311 aa8.53□□□□□ -1.04
HDAC9-210ENST00000428307 DSCAML1Q8TD84 2053 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 TSPAN4O14817 238 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 UQCRFS1P47985 274 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 RELBQ01201 579 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 PRB3Q04118 309 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-210ENST00000428307 TFF3Q07654 80 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 LRRC75BQ2VPJ9 315 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 AVPI1Q5T686 147 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 OR4A47Q6IF82 309 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 SVBPQ8N300 66 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 CIB3Q96Q77 187 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-210ENST00000428307 NKX6-2Q9C056 277 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-210ENST00000428307 WDR61Q9GZS3 305 aaKnown RBP8.52□□□□□ -1.05
HDAC9-210ENST00000428307 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
HDAC9-210ENST00000428307 EIF3GO75821 320 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC9-210ENST00000428307 DAOP14920 347 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 PLA2G5P39877 138 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 KIR2DS2P43631 304 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 DLX1P56177 255 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 RARRES2Q99969 163 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 SEC11CQ9BY50 192 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 HEYLQ9NQ87 328 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-210ENST00000428307 RPRMQ9NS64 109 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 KAAG1Q9UBP8 84 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 ACACBO00763 2458 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 HRNRQ86YZ3 2850 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-210ENST00000428307 MALRD1Q5VYJ5 2156 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 PMS2P5A8MQ11 134 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 IFNA10P01566 189 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 MYOD1P15172 320 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 ELLP55199 621 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-210ENST00000428307 DIAPH2-AS1Q14236 149 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 SPSB3Q6PJ21 355 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 ABHD12Q8N2K0 398 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 OR10X1Q8NGY0 326 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 TAF15Q92804 592 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC9-210ENST00000428307 SCRT1Q9BWW7 348 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 SLC35D1Q9NTN3 355 aa8.51□□□□□ -1.05
HDAC9-210ENST00000428307 FAM74A7A6NL05 159 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 SRRM4A7MD48 611 aaKnown RBP8.5□□□□□ -1.05
HDAC9-210ENST00000428307 FAM157AC9JC47 383 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 H7C2Y5 167 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 NDUFA2O43678 99 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 OPN1MWP04001 364 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 OPN1MW2P0DN77 364 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 OPN1MW3P0DN78 364 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 SPCS3P61009 180 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 FAM74A3Q4VXF1 159 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 C10orf91Q5T1B1 145 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 TMEM88Q6PEY1 159 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 OR13D1Q8NGV5 346 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 ADTRPQ96IZ2 230 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 HINT2Q9BX68 163 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 MRPL20Q9BYC9 149 aaKnown RBP8.5□□□□□ -1.05
HDAC9-210ENST00000428307 CARHSP1Q9Y2V2 147 aaKnown RBP8.5□□□□□ -1.05
HDAC9-210ENST00000428307 C15orf62A8K5M9 175 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 PPIHO43447 177 aaKnown RBP8.5□□□□□ -1.05
HDAC9-210ENST00000428307 SOD3P08294 240 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 TLE4Q04727 773 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 PEA15Q15121 130 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 HAGHQ16775 308 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 TMEM30BQ3MIR4 351 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 COMMD1Q8N668 190 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 OR10A7Q8NGE5 316 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 PINX1Q96BK5 328 aaKnown RBP8.5□□□□□ -1.05
HDAC9-210ENST00000428307 TMEM204Q9BSN7 226 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 HIPK2Q9H2X6 1198 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 TCF19Q9Y242 345 aa8.5□□□□□ -1.05
HDAC9-210ENST00000428307 ASH1LQ9NR48 2969 aaKnown RBP8.5□□□□□ -1.05
HDAC9-210ENST00000428307 TANC2Q9HCD6 1990 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 FAM90A9PA6NNJ1 464 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 RRHO14718 337 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 HRASP01112 189 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 GNLYP22749 145 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 NPBWR1P48145 328 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 HOXA1P49639 335 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-210ENST00000428307 RTL8BQ17RB0 113 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 TMEM155Q4W5P6 130 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 AKIRIN2Q53H80 203 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 LCN15Q6UWW0 184 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 CLCC1Q96S66 551 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 PBDC1Q9BVG4 233 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 TMEM147Q9BVK8 224 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 CFAP46Q8IYW2 2715 aa8.49□□□□□ -1.05
HDAC9-210ENST00000428307 C15orf61A6NNL5 157 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms