RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MCRIP2Q9BUT9 160 aaKnown RBP4.92□□□□□ -1.62
HERC4-206ENST00000427635 BEX4Q9NWD9 120 aaPredicted RBP4.92□□□□□ -1.62
HERC4-206ENST00000427635 TRAV9-2A0A087WT02 112 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 SIVA1O15304 175 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 UPK3AO75631 287 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 NDUFB6O95139 128 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 EFEMP2O95967 443 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 CELA2AP08217 269 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 TDGF1P3P51864 188 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 RAE1P78406 368 aaKnown RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 SP5Q6BEB4 398 aaPredicted RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 CLEC19AQ6UXS0 136 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 LHFPL4Q7Z7J7 247 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 LRRC75AQ8NAA5 344 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 TMEM54Q969K7 222 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 JPT1Q9UK76 154 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 TIAM2Q8IVF5 1701 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 IGHV3-66A0A0C4DH42 116 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 RBM11P57052 281 aaKnown RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 TTC32Q5I0X7 151 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 MRPL54Q6P161 138 aaKnown RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 TMEM88Q6PEY1 159 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 GDF15Q99988 308 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 A0A0J9YW62 118 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 TRBV7-9A0A0J9YWB2 115 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 A0A0U1RRA0 63 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 CLDN34H7C241 214 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 SIGLEC5O15389 551 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 BGLAPP02818 100 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 REG1AP05451 166 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 WNT2P09544 360 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 MUC1P15941 1255 aaPredicted RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 POLR2IP36954 125 aaKnown RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 ERVS71-1P61550 626 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 PSG4Q00888 419 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 KLF14Q8TD94 323 aaPredicted RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 FAM110AQ9BQ89 295 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 C7orf66A4D0T2 115 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 PITX3O75364 302 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 TTRP02766 147 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 EFNB2P52799 333 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 FGF12P61328 243 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 ZP4Q12836 540 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 SURF2Q15527 256 aaPredicted RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 POC1AQ8NBT0 407 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 OR5AN1Q8NGI8 311 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 SHISA4Q96DD7 197 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 SIGMAR1Q99720 223 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 TMEM70Q9BUB7 260 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 TNFSF18Q9UNG2 199 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 TRAV39A0A0B4J263 110 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 FOXI3A8MTJ6 420 aaPredicted RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 E9PLN8 166 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 DLEU1O43261 78 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 ZNF253O75346 499 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 MOSP00540 346 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 SLC25A16P16260 332 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 TIRAPP58753 221 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 VN1R4Q7Z5H5 301 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 LINC01356Q8N9X3 169 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 SCARF2Q96GP6 870 aaPredicted RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 ZNF385AQ96PM9 386 aaKnown RBP4.91□□□□□ -1.62
HERC4-206ENST00000427635 VKORC1Q9BQB6 163 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 GSX2Q9BZM3 304 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 DLL3Q9NYJ7 618 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 VAX2Q9UIW0 290 aa4.91□□□□□ -1.62
HERC4-206ENST00000427635 ODAMA1E959 279 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 TM4SF5O14894 197 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 CD5P06127 495 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 RPL29P47914 159 aaKnown RBP4.9□□□□□ -1.62
HERC4-206ENST00000427635 MMP16P51512 607 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 FAM27E3Q08E93 113 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 MESTQ5EB52 335 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 CBLN3Q6UW01 205 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 FAM24BQ8N5W8 94 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 ZNF488Q96MN9 340 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 TP53RKQ96S44 253 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 CHST5Q9GZS9 411 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 PXMP4Q9Y6I8 212 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 MYH15Q9Y2K3 1946 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 CACNA1BQ00975 2339 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 IGLV3-16A0A075B6K0 115 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 TRGV11A0A075B6L2 103 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 A0A1W2PQF6 199 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 TMEM50BP56557 158 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 SRSF4Q08170 494 aaKnown RBP4.9□□□□□ -1.62
HERC4-206ENST00000427635 BSXQ3C1V8 233 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 CLLU1Q5K131 121 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 DPPA3Q6W0C5 159 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 TPRX1Q8N7U7 411 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 TMEM105Q8N8V8 129 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 OR11H4Q8NGC9 324 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 CLDND2Q8NHS1 167 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 WDR34Q96EX3 536 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 SCMH1Q96GD3 660 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 TMEFF2Q9UIK5 374 aaPredicted RBP4.9□□□□□ -1.62
HERC4-206ENST00000427635 MYH7BA7E2Y1 1941 aa4.9□□□□□ -1.62
HERC4-206ENST00000427635 ANKRD20A5PA0PJZ0 165 aa4.9□□□□□ -1.63
HERC4-206ENST00000427635 AP4M1O00189 453 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms