RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.85□□□□□ -0.83
PTPRN-204ENST00000423636 RAXQ9Y2V3 346 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 KPTNQ9Y664 436 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 A0A0U1RQK1 487 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 CEACAM4O75871 244 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 SRP19P09132 144 aaKnown RBP9.85□□□□□ -0.83
PTPRN-204ENST00000423636 GLRXP35754 106 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 SMCO4Q9NRQ5 59 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 STRAPQ9Y3F4 350 aaKnown RBP9.85□□□□□ -0.83
PTPRN-204ENST00000423636 CXCL1P09341 107 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 LMO1P25800 156 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 RAB13P51153 203 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 RPS23P62266 143 aaKnown RBP9.84□□□□□ -0.83
PTPRN-204ENST00000423636 HABP2Q14520 560 aaPredicted RBP9.84□□□□□ -0.83
PTPRN-204ENST00000423636 MBNL2Q5VZF2 373 aaKnown RBP9.84□□□□□ -0.83
PTPRN-204ENST00000423636 CLDND2Q8NHS1 167 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 COL25A1Q9BXS0 654 aaPredicted RBP9.84□□□□□ -0.83
PTPRN-204ENST00000423636 WDR61Q9GZS3 305 aaKnown RBP9.84□□□□□ -0.83
PTPRN-204ENST00000423636 SELENOVP59797 346 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 HBG1P69891 147 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 HBG2P69892 147 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 OR10P1Q8NGE3 313 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 OR10W1Q8NGF6 305 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 LYPD6BQ8NI32 183 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 FAM57AQ8TBR7 257 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 C16orf97H3BN30 126 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 THBDP07204 575 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 LOXL3P58215 753 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 TLE4Q04727 773 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 ADIRFQ15847 76 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 C10orf55Q5SWW7 151 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 CST9LP1Q5W188 147 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 GNPNAT1Q96EK6 184 aaPredicted RBP9.84□□□□□ -0.83
PTPRN-204ENST00000423636 S1PR3Q99500 378 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 IFT22Q9H7X7 185 aa9.84□□□□□ -0.83
PTPRN-204ENST00000423636 FCN3O75636 299 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 YIF1AO95070 293 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 S100A6P06703 90 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 CTRB1P17538 263 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 HOXA1P49639 335 aaPredicted RBP9.83□□□□□ -0.84
PTPRN-204ENST00000423636 C17orf58Q2M2W7 97 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 PRR31Q5SQ13 230 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 MIC13Q5XKP0 118 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 CTRB2Q6GPI1 263 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 TCF23Q7RTU1 214 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 RHOVQ96L33 236 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 IFI27L2Q9H2X8 130 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 TMEM140Q9NV12 185 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 RNF7Q9UBF6 113 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 PRSS44E7EML9 344 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 MGST3O14880 152 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 REG1AP05451 166 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 ADIPOQQ15848 244 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 SRSF7Q16629 238 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTPRN-204ENST00000423636 C1orf162Q8NEQ5 155 aaPredicted RBP9.83□□□□□ -0.84
PTPRN-204ENST00000423636 OR10G4Q8NGN3 311 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 OR10G9Q8NGN4 311 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 OR10G7Q8NGN6 311 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 OR4F5Q8NH21 305 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 OR4F4Q96R69 305 aa9.83□□□□□ -0.84
PTPRN-204ENST00000423636 SRRM4A7MD48 611 aaKnown RBP9.82□□□□□ -0.84
PTPRN-204ENST00000423636 C1QTNF9BB2RNN3 333 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 PAGE4O60829 102 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 DFFBO76075 338 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 LRRC75BQ2VPJ9 315 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 LSM10Q969L4 123 aaKnown RBP9.82□□□□□ -0.84
PTPRN-204ENST00000423636 DERL1Q9BUN8 251 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 CRYABP02511 175 aaKnown RBP9.82□□□□□ -0.84
PTPRN-204ENST00000423636 IRF2P14316 349 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 CD200P41217 278 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 MRPS11P82912 194 aaKnown RBP9.82□□□□□ -0.84
PTPRN-204ENST00000423636 MSMO1Q15800 293 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 CYB5BO43169 146 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 SPATA31B1PQ5VZV4 182 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 ZNF383Q8NA42 475 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 SAP30LQ9HAJ7 183 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 DYNLRB1Q9NP97 96 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 NDRG3Q9UGV2 375 aa9.82□□□□□ -0.84
PTPRN-204ENST00000423636 DSCAML1Q8TD84 2053 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 RNF212BA8MTL3 300 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 SLC25A6P12236 298 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 CD24P25063 80 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 FABP9Q0Z7S8 132 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 TBR1Q16650 682 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 IL22RA2Q969J5 263 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 RAB24Q969Q5 203 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 SNX22Q96L94 193 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 GAFA1Q96PS6 74 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 OR6C3Q9NZP0 311 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 HSPB7Q9UBY9 170 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 USP9YO00507 2555 aaPredicted RBP9.81□□□□□ -0.84
PTPRN-204ENST00000423636 TRGV10A0A0A0MS01 117 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 C15orf62A8K5M9 175 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 ENSAO43768 121 aaKnown RBP9.81□□□□□ -0.84
PTPRN-204ENST00000423636 RPL31P62899 125 aaKnown RBP9.81□□□□□ -0.84
PTPRN-204ENST00000423636 GFI1BQ5VTD9 330 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 TMEM108Q6UXF1 575 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 Q8WTZ3 238 aa9.81□□□□□ -0.84
PTPRN-204ENST00000423636 PINX1Q96BK5 328 aaKnown RBP9.81□□□□□ -0.84
PTPRN-204ENST00000423636 NIPSNAP3BQ9BS92 247 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms