RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OR9G9P0C7N8 305 aa17.06■□□□□ 0.32
GPC1-202ENST00000420138 PJVKQ0ZLH3 352 aa17.06■□□□□ 0.32
GPC1-202ENST00000420138 VKORC1L1Q8N0U8 176 aa17.06■□□□□ 0.32
GPC1-202ENST00000420138 Q8N7P7 452 aa17.06■□□□□ 0.32
GPC1-202ENST00000420138 SSBP3Q9BWW4 388 aaPredicted RBP17.06■□□□□ 0.32
GPC1-202ENST00000420138 MRPL20Q9BYC9 149 aaKnown RBP17.06■□□□□ 0.32
GPC1-202ENST00000420138 PARP11Q9NR21 331 aa17.06■□□□□ 0.32
GPC1-202ENST00000420138 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.06■□□□□ 0.32
GPC1-202ENST00000420138 TMA7Q9Y2S6 64 aaKnown RBP17.06■□□□□ 0.32
GPC1-202ENST00000420138 AKAP6Q13023 2319 aa17.06■□□□□ 0.32
GPC1-202ENST00000420138 LIPFP07098 398 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 PRB3Q04118 309 aaPredicted RBP17.05■□□□□ 0.32
GPC1-202ENST00000420138 TNFRSF9Q07011 255 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 AARDQ4LEZ3 155 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 NARS2Q96I59 477 aaKnown RBP17.05■□□□□ 0.32
GPC1-202ENST00000420138 RAB40CQ96S21 281 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 HRH4Q9H3N8 390 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 DOCK11Q5JSL3 2073 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 IGHV2-26A0A0B4J1V2 119 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 A0A1W2PPH5 198 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 IGLV1-47P01700 117 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 SPP1P10451 314 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 NQO2P16083 231 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 FAM71F2Q6NXP2 309 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 OR10X1Q8NGY0 326 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 WSB1Q9Y6I7 421 aa17.05■□□□□ 0.32
GPC1-202ENST00000420138 FAM90A9PA6NNJ1 464 aa17.04■□□□□ 0.32
GPC1-202ENST00000420138 APOC3P02656 99 aa17.04■□□□□ 0.32
GPC1-202ENST00000420138 IGKV1-16P04430 117 aa17.04■□□□□ 0.32
GPC1-202ENST00000420138 UBE2KP61086 200 aa17.04■□□□□ 0.32
GPC1-202ENST00000420138 BAXQ07812 192 aa17.04■□□□□ 0.32
GPC1-202ENST00000420138 BTNL8Q6UX41 500 aa17.04■□□□□ 0.32
GPC1-202ENST00000420138 SSX9Q7RTT3 188 aa17.04■□□□□ 0.32
GPC1-202ENST00000420138 OR5AN1Q8NGI8 311 aa17.04■□□□□ 0.32
GPC1-202ENST00000420138 TMEM186Q96B77 213 aa17.04■□□□□ 0.32
GPC1-202ENST00000420138 LOC105371242A0A075B767 164 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 TMEM218A2RU14 115 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 TXNL1O43396 289 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 IGHV2-5P01817 119 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 IAPPP10997 89 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 ZFP36P26651 326 aaKnown RBP17.03■□□□□ 0.32
GPC1-202ENST00000420138 REG1BP48304 166 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 ZNF266Q14584 549 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 TNFRSF14Q92956 283 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 BPESC1Q9GZL8 116 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 RBKSQ9H477 322 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 TRAV3A0A0B4J244 114 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 H0YJW9 148 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 H3BP45 60 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 POU2AF1Q16633 256 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 Q6ZRG5 221 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 NABP2Q9BQ15 211 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 SLC35D1Q9NTN3 355 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 TMEM140Q9NV12 185 aa17.03■□□□□ 0.32
GPC1-202ENST00000420138 USP9YO00507 2555 aaPredicted RBP17.02■□□□□ 0.32
GPC1-202ENST00000420138 ARHGDIBP52566 201 aa17.02■□□□□ 0.31
GPC1-202ENST00000420138 F2RL1P55085 397 aa17.02■□□□□ 0.31
GPC1-202ENST00000420138 RPL23AP62750 156 aaKnown RBP17.02■□□□□ 0.31
GPC1-202ENST00000420138 RELBQ01201 579 aa17.02■□□□□ 0.31
GPC1-202ENST00000420138 QTRT1Q9BXR0 403 aaKnown RBP17.02■□□□□ 0.31
GPC1-202ENST00000420138 MS4A7Q9GZW8 240 aaPredicted RBP17.02■□□□□ 0.31
GPC1-202ENST00000420138 ONECUT1Q9UBC0 465 aa17.02■□□□□ 0.31
GPC1-202ENST00000420138 DOPEY2Q9Y3R5 2298 aa17.01■□□□□ 0.31
GPC1-202ENST00000420138 SRRM4A7MD48 611 aaKnown RBP17.01■□□□□ 0.31
GPC1-202ENST00000420138 IL6RP08887 468 aaPredicted RBP17.01■□□□□ 0.31
GPC1-202ENST00000420138 RAB5CP51148 216 aa17.01■□□□□ 0.31
GPC1-202ENST00000420138 TAS2R30P59541 319 aa17.01■□□□□ 0.31
GPC1-202ENST00000420138 CLINT1Q14677 625 aa17.01■□□□□ 0.31
GPC1-202ENST00000420138 HLA-DRB5Q30154 266 aa17.01■□□□□ 0.31
GPC1-202ENST00000420138 HSD17B11Q8NBQ5 300 aa17.01■□□□□ 0.31
GPC1-202ENST00000420138 RHOVQ96L33 236 aa17.01■□□□□ 0.31
GPC1-202ENST00000420138 CST7O76096 145 aa17■□□□□ 0.31
GPC1-202ENST00000420138 DYNLT3P51808 116 aa17■□□□□ 0.31
GPC1-202ENST00000420138 OR2B8PP59922 312 aa17■□□□□ 0.31
GPC1-202ENST00000420138 ERVK-16P61578 105 aa17■□□□□ 0.31
GPC1-202ENST00000420138 LMO4P61968 165 aa17■□□□□ 0.31
GPC1-202ENST00000420138 ARF6P62330 175 aa17■□□□□ 0.31
GPC1-202ENST00000420138 AKR1C1Q04828 323 aa17■□□□□ 0.31
GPC1-202ENST00000420138 DHRS7BQ6IAN0 325 aaPredicted RBP17■□□□□ 0.31
GPC1-202ENST00000420138 BEND2Q8NDZ0 799 aa17■□□□□ 0.31
GPC1-202ENST00000420138 OR5C1Q8NGR4 320 aa17■□□□□ 0.31
GPC1-202ENST00000420138 OR13D1Q8NGV5 346 aa17■□□□□ 0.31
GPC1-202ENST00000420138 LYPD6BQ8NI32 183 aa17■□□□□ 0.31
GPC1-202ENST00000420138 NRGNQ92686 78 aa17■□□□□ 0.31
GPC1-202ENST00000420138 CLEC7AQ9BXN2 247 aa17■□□□□ 0.31
GPC1-202ENST00000420138 PSENENQ9NZ42 101 aa17■□□□□ 0.31
GPC1-202ENST00000420138 STRAPQ9Y3F4 350 aaKnown RBP17■□□□□ 0.31
GPC1-202ENST00000420138 SRSF3P84103 164 aaKnown RBP17■□□□□ 0.31
GPC1-202ENST00000420138 PAX2Q02962 417 aa17■□□□□ 0.31
GPC1-202ENST00000420138 RTL8BQ17RB0 113 aa17■□□□□ 0.31
GPC1-202ENST00000420138 OR4A47Q6IF82 309 aa17■□□□□ 0.31
GPC1-202ENST00000420138 CLDND2Q8NHS1 167 aa17■□□□□ 0.31
GPC1-202ENST00000420138 ZDHHC16Q969W1 377 aa17■□□□□ 0.31
GPC1-202ENST00000420138 PSMG3-AS1Q96PY0 264 aa17■□□□□ 0.31
GPC1-202ENST00000420138 SH3BGRL3Q9H299 93 aa17■□□□□ 0.31
GPC1-202ENST00000420138 CACFD1Q9UGQ2 172 aa17■□□□□ 0.31
GPC1-202ENST00000420138 M0R1W7 72 aa16.99■□□□□ 0.31
GPC1-202ENST00000420138 DEFA5Q01523 94 aa16.99■□□□□ 0.31
GPC1-202ENST00000420138 ZNF787Q6DD87 383 aa16.99■□□□□ 0.31
GPC1-202ENST00000420138 OR4P4Q8NGL7 312 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms