RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 RHOVQ96L33 236 aa11.12□□□□□ -0.63
CHMP5-202ENST00000419016 C11orf1Q9H5F2 150 aa11.12□□□□□ -0.63
CHMP5-202ENST00000419016 AUP1Q9Y679 476 aa11.12□□□□□ -0.63
CHMP5-202ENST00000419016 ITPR3Q14573 2671 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 A0A1W2PRD5 423 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 A0A1W2PRF3 423 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 A0A1W2PRM7 423 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 K7EPK0 472 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 HRASP01112 189 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 EPHA1P21709 976 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 RAB13P51153 203 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 ARHGDIBP52566 201 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 THOC7Q6I9Y2 204 aaKnown RBP11.11□□□□□ -0.63
CHMP5-202ENST00000419016 H2BFWTQ7Z2G1 175 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 FAM71E2Q8N5Q1 922 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 OR4C13Q8NGP0 309 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 RNASE11Q8TAA1 199 aaKnown RBP11.11□□□□□ -0.63
CHMP5-202ENST00000419016 GRPEL2Q8TAA5 225 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 C17orf50Q8WW18 174 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 OR5AC2Q9NZP5 309 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 MBD2Q9UBB5 411 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 POMT1Q9Y6A1 747 aa11.11□□□□□ -0.63
CHMP5-202ENST00000419016 ST8SIA3O43173 380 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 DEDDO75618 318 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 AVPP01185 164 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 OR9G9P0C7N8 305 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 LGALSLQ3ZCW2 172 aaPredicted RBP11.1□□□□□ -0.63
CHMP5-202ENST00000419016 OR1S1Q8NH92 325 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 FLYWCH2Q96CP2 140 aaKnown RBP11.1□□□□□ -0.63
CHMP5-202ENST00000419016 RITA1Q96K30 269 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 C7orf69Q9H7B7 122 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 RCL1Q9Y2P8 373 aaKnown RBP11.1□□□□□ -0.63
CHMP5-202ENST00000419016 H7C2Y5 167 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 TIMM23O14925 209 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 NPFFO15130 113 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 IGLV2-23P01705 113 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 SAA4P35542 130 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
CHMP5-202ENST00000419016 RELBQ01201 579 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 OR4A47Q6IF82 309 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 MOB3BQ86TA1 216 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 PUSL1Q8N0Z8 303 aaKnown RBP11.1□□□□□ -0.63
CHMP5-202ENST00000419016 DMBX1Q8NFW5 382 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 THAP6Q8TBB0 222 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 MALSU1Q96EH3 234 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.1□□□□□ -0.63
CHMP5-202ENST00000419016 ZFP57Q9NU63 452 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 TMEM140Q9NV12 185 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 TNFSF18Q9UNG2 199 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 HILPDAQ9Y5L2 63 aa11.1□□□□□ -0.63
CHMP5-202ENST00000419016 CELSR1Q9NYQ6 3014 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 FXYD6-FXYD2A0A087WZ82 144 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 IGHV3-72A0A0B4J1Y9 119 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 TRAV3A0A0B4J244 114 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 IGHV1-69DA0A0B4J2H0 117 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 FAM90A26D6RGX4 464 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 J3QLI3 93 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 IGHV1-69P01742 117 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 CXCL2P19875 107 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 CD1BP29016 333 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 LGALS4P56470 323 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 ERVK-16P61578 105 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 SSX2Q16385 188 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 SSX9Q7RTT3 188 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 ZNF546Q86UE3 836 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 HSPB7Q9UBY9 170 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 ZNF469Q96JG9 3925 aaPredicted RBP11.09□□□□□ -0.63
CHMP5-202ENST00000419016 AKAP9Q99996 3911 aa11.09□□□□□ -0.63
CHMP5-202ENST00000419016 SHOXO15266 292 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 VENTXO95231 258 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 TGFAP01135 160 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 PET100P0DJ07 73 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 PAX6P26367 422 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 S100A10P60903 97 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 POLR2GP62487 172 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHMP5-202ENST00000419016 KLF17Q5JT82 389 aaPredicted RBP11.08□□□□□ -0.64
CHMP5-202ENST00000419016 CCDC144NLQ6NUI1 221 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 FOXRED2Q8IWF2 684 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 CIARTQ8N365 385 aaPredicted RBP11.08□□□□□ -0.64
CHMP5-202ENST00000419016 HARBI1Q96MB7 349 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 MS4A7Q9GZW8 240 aaPredicted RBP11.08□□□□□ -0.64
CHMP5-202ENST00000419016 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 RNF222A6NCQ9 220 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 TMEM50AO95807 157 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 SCGB1D2O95969 90 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 SAA1P0DJI8 122 aaPredicted RBP11.08□□□□□ -0.64
CHMP5-202ENST00000419016 IGHV4-38-2P0DP08 117 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 LGALS7P47929 136 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 PDLIM3Q53GG5 364 aaPredicted RBP11.08□□□□□ -0.64
CHMP5-202ENST00000419016 RNF5Q99942 180 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 BET1LQ9NYM9 111 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 NSG2Q9Y328 171 aa11.08□□□□□ -0.64
CHMP5-202ENST00000419016 LSM5Q9Y4Y9 91 aaKnown RBP11.08□□□□□ -0.64
CHMP5-202ENST00000419016 UPK2O00526 184 aa11.07□□□□□ -0.64
CHMP5-202ENST00000419016 ARPC5O15511 151 aa11.07□□□□□ -0.64
CHMP5-202ENST00000419016 SNAPC5O75971 98 aa11.07□□□□□ -0.64
CHMP5-202ENST00000419016 CRYGBP07316 175 aa11.07□□□□□ -0.64
CHMP5-202ENST00000419016 PAX9P55771 341 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms