RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 CYTL1Q9NRR1 136 aa16.87■□□□□ 0.29
CASC3-203ENST00000418132 SLC35D1Q9NTN3 355 aa16.87■□□□□ 0.29
CASC3-203ENST00000418132 AMMECR1Q9Y4X0 333 aaPredicted RBP16.87■□□□□ 0.29
CASC3-203ENST00000418132 LSM5Q9Y4Y9 91 aaKnown RBP16.87■□□□□ 0.29
CASC3-203ENST00000418132 NAV2Q8IVL1 2488 aa16.87■□□□□ 0.29
CASC3-203ENST00000418132 REG1BP48304 166 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 CXorf66Q5JRM2 361 aaPredicted RBP16.86■□□□□ 0.29
CASC3-203ENST00000418132 DHRS7BQ6IAN0 325 aaPredicted RBP16.86■□□□□ 0.29
CASC3-203ENST00000418132 VMO1Q7Z5L0 202 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 TGIF2LXQ8IUE1 241 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 MFSD2BA6NFX1 497 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 CRYZL1O95825 349 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 MMP9P14780 707 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 NQO2P16083 231 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 RTL8BQ17RB0 113 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 STOML3Q8TAV4 291 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 PCGF1Q9BSM1 259 aa16.86■□□□□ 0.29
CASC3-203ENST00000418132 ODF3BA8MYP8 253 aa16.85■□□□□ 0.29
CASC3-203ENST00000418132 H0YJW9 148 aa16.85■□□□□ 0.29
CASC3-203ENST00000418132 DVL1P1P54792 670 aaPredicted RBP16.85■□□□□ 0.29
CASC3-203ENST00000418132 MIDNQ504T8 468 aa16.85■□□□□ 0.29
CASC3-203ENST00000418132 H2BFWTQ7Z2G1 175 aa16.85■□□□□ 0.29
CASC3-203ENST00000418132 PFDN2Q9UHV9 154 aa16.85■□□□□ 0.29
CASC3-203ENST00000418132 RCL1Q9Y2P8 373 aaKnown RBP16.85■□□□□ 0.29
CASC3-203ENST00000418132 WNK2Q9Y3S1 2297 aa16.85■□□□□ 0.29
CASC3-203ENST00000418132 LY6LH3BQJ8 138 aa16.84■□□□□ 0.29
CASC3-203ENST00000418132 TEX46H3BTG2 121 aa16.84■□□□□ 0.29
CASC3-203ENST00000418132 APOA2P02652 100 aa16.84■□□□□ 0.29
CASC3-203ENST00000418132 HKR1P10072 659 aa16.84■□□□□ 0.29
CASC3-203ENST00000418132 MBD6Q96DN6 1003 aa16.84■□□□□ 0.29
CASC3-203ENST00000418132 IGKV1-16P04430 117 aa16.84■□□□□ 0.29
CASC3-203ENST00000418132 USF1P22415 310 aaPredicted RBP16.84■□□□□ 0.29
CASC3-203ENST00000418132 KLRD1Q13241 179 aa16.84■□□□□ 0.29
CASC3-203ENST00000418132 LPAR2Q9HBW0 351 aa16.84■□□□□ 0.29
CASC3-203ENST00000418132 INSIG2Q9Y5U4 225 aa16.84■□□□□ 0.29
CASC3-203ENST00000418132 FAM90A9PA6NNJ1 464 aa16.83■□□□□ 0.28
CASC3-203ENST00000418132 TOX4O94842 621 aa16.83■□□□□ 0.28
CASC3-203ENST00000418132 ARG1P05089 322 aa16.83■□□□□ 0.28
CASC3-203ENST00000418132 TPT1P13693 172 aaKnown RBP16.83■□□□□ 0.28
CASC3-203ENST00000418132 ERVK-16P61578 105 aa16.83■□□□□ 0.28
CASC3-203ENST00000418132 POU2AF1Q16633 256 aa16.83■□□□□ 0.28
CASC3-203ENST00000418132 BAP18Q8IXM2 172 aa16.83■□□□□ 0.28
CASC3-203ENST00000418132 DMBX1Q8NFW5 382 aa16.83■□□□□ 0.28
CASC3-203ENST00000418132 C11orf1Q9H5F2 150 aa16.83■□□□□ 0.28
CASC3-203ENST00000418132 E5RGE8 158 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 RNASEK-C17orf49H0YIS7 233 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 TXNL1O43396 289 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 GAPDHP04406 335 aaKnown RBP16.82■□□□□ 0.28
CASC3-203ENST00000418132 HOXB4P17483 251 aaPredicted RBP16.82■□□□□ 0.28
CASC3-203ENST00000418132 ARHGDIBP52566 201 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 POLR2GP62487 172 aaKnown RBP eCLIP16.82■□□□□ 0.28
CASC3-203ENST00000418132 TBX15Q96SF7 602 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.82■□□□□ 0.28
CASC3-203ENST00000418132 NSG2Q9Y328 171 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 CSMD2Q7Z408 3487 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 A0A096LNT2 108 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 FAM90A26D6RGX4 464 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 HRASP01112 189 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 HTR1DP28221 377 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 RPL12P30050 165 aaKnown RBP16.82■□□□□ 0.28
CASC3-203ENST00000418132 MC5RP33032 325 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 LDLRAD2Q5SZI1 272 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 PDPNQ86YL7 162 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 VKORC1L1Q8N0U8 176 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 RHOVQ96L33 236 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 MAGT1Q9H0U3 335 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 DPM3Q9P2X0 92 aa16.82■□□□□ 0.28
CASC3-203ENST00000418132 MAP1AP78559 2803 aaPredicted RBP16.81■□□□□ 0.28
CASC3-203ENST00000418132 PAX8Q06710 450 aa16.81■□□□□ 0.28
CASC3-203ENST00000418132 TMEM177Q53S58 311 aa16.81■□□□□ 0.28
CASC3-203ENST00000418132 SSX9Q7RTT3 188 aa16.81■□□□□ 0.28
CASC3-203ENST00000418132 OSR1Q8TAX0 266 aaPredicted RBP16.81■□□□□ 0.28
CASC3-203ENST00000418132 RPEQ96AT9 228 aa16.81■□□□□ 0.28
CASC3-203ENST00000418132 ZC4H2Q9NQZ6 224 aa16.81■□□□□ 0.28
CASC3-203ENST00000418132 WASHC3Q9Y3C0 194 aa16.81■□□□□ 0.28
CASC3-203ENST00000418132 IGHV1-3A0A0C4DH29 117 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 H7C2Y5 167 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 NXPH3O95157 252 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 OR9G9P0C7N8 305 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 TPTE2P1Q5T6R2 138 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 CCDC28AQ8IWP9 274 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 LHX4Q969G2 390 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 RBMXL1Q96E39 390 aaKnown RBP16.8■□□□□ 0.28
CASC3-203ENST00000418132 TMEM140Q9NV12 185 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 CEACAM3P40198 252 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 RAB13P51153 203 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 AARDQ4LEZ3 155 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 C1orf159Q96HA4 380 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 AIFM2Q9BRQ8 373 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 HSPB7Q9UBY9 170 aa16.8■□□□□ 0.28
CASC3-203ENST00000418132 SHOXO15266 292 aa16.79■□□□□ 0.28
CASC3-203ENST00000418132 SSSCA1O60232 199 aa16.79■□□□□ 0.28
CASC3-203ENST00000418132 PVALBP20472 110 aaPredicted RBP16.79■□□□□ 0.28
CASC3-203ENST00000418132 P2RY1P47900 373 aa16.79■□□□□ 0.28
CASC3-203ENST00000418132 OR4C13Q8NGP0 309 aa16.79■□□□□ 0.28
CASC3-203ENST00000418132 FLYWCH2Q96CP2 140 aaKnown RBP16.79■□□□□ 0.28
CASC3-203ENST00000418132 SRRM4A7MD48 611 aaKnown RBP16.78■□□□□ 0.28
CASC3-203ENST00000418132 WRBO00258 174 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 TAAR5O14804 337 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 SYNGR2O43760 224 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms