RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 MEF2DQ14814 521 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 ECSCRQ19T08 205 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 SCGB2B2Q4G0G5 96 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 KHDC1LQ5JSQ8 128 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 IDO2Q6ZQW0 420 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 PPP1R27Q86WC6 154 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 CMTM1Q8IZ96 169 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 SLC38A6Q8IZM9 456 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 VKORC1L1Q8N0U8 176 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 SPAG16Q8N0X2 631 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 Q8N402 240 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 THAP7Q9BT49 309 aaPredicted RBP9.81□□□□□ -0.84
SKA1-203ENST00000417656 FAM103A1Q9BTL3 118 aaKnown RBP9.81□□□□□ -0.84
SKA1-203ENST00000417656 RSRP1Q9BUV0 290 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 SRRQ9GZT4 340 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 ZNF580Q9UK33 172 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 A0A1W2PRX2 142 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 DISC1C4P0D8 188 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 G3V318 75 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 M0QZ24 198 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 ARPC1BO15143 372 aaKnown RBP9.8□□□□□ -0.84
SKA1-203ENST00000417656 RBFOX2O43251 390 aaKnown RBP eCLIP9.8□□□□□ -0.84
SKA1-203ENST00000417656 S1PR2O95136 353 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 PI3P19957 117 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 PTBP1P26599 531 aaKnown RBP eCLIP9.8□□□□□ -0.84
SKA1-203ENST00000417656 ETV6P41212 452 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 UCP3P55916 312 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 SSBP2P81877 361 aaPredicted RBP9.8□□□□□ -0.84
SKA1-203ENST00000417656 CFHR3Q02985 330 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 PJVKQ0ZLH3 352 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 MRGPRG-AS1Q2M3A8 158 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 C2orf68Q2NKX9 166 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 CNPY1Q3B7I2 92 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 NSUN5P1Q3KNT7 163 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 SGMS2Q8NHU3 365 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 GRPEL2Q8TAA5 225 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 ARPC1AQ92747 370 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 MRGPRFQ96AM1 343 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 SLC2A9Q9NRM0 540 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 WSB1Q9Y6I7 421 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 PLXNB1O43157 2135 aa9.8□□□□□ -0.84
SKA1-203ENST00000417656 TRAV41A0A0B4J266 112 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 TCRBV4S1A1TA0A5B7 111 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 ADARB2-AS1A8MUL3 147 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 EGR2P11161 476 aaPredicted RBP9.79□□□□□ -0.84
SKA1-203ENST00000417656 CD83Q01151 205 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 KLF9Q13886 244 aaPredicted RBP9.79□□□□□ -0.84
SKA1-203ENST00000417656 FXYD3Q14802 87 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 LPCAT3Q6P1A2 487 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 LCNL1Q6ZST4 164 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 SSX9Q7RTT3 188 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 TBC1D26Q86UD7 250 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 NDUFA11Q86Y39 141 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 TEX45Q8NA69 505 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 POC5Q8NA72 575 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 OR13C8Q8NGS7 320 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 MARCH1Q8TCQ1 289 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 GON7Q9BXV9 100 aa9.79□□□□□ -0.84
SKA1-203ENST00000417656 WIPF1O43516 503 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 KBTBD11O94819 623 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 CNIH1O95406 144 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 HRASP01112 189 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 OPN1MWP04001 364 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 OPN1MW2P0DN77 364 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 OPN1MW3P0DN78 364 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 F2RP25116 425 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 S100GP29377 79 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 CRIP2P52943 208 aaPredicted RBP9.78□□□□□ -0.84
SKA1-203ENST00000417656 TNXAQ16473 311 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 PRSS8Q16651 343 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 C19orf54Q5BKX5 351 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 PRR31Q5SQ13 230 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 C10orf55Q5SWW7 151 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 ZNF562Q6V9R5 426 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 PUSL1Q8N0Z8 303 aaKnown RBP9.78□□□□□ -0.84
SKA1-203ENST00000417656 COMMD1Q8N668 190 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 OR51S1Q8NGJ8 323 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 TERB2Q8NHR7 220 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 RHOVQ96L33 236 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 PRRT1Q99946 306 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 ZNF430Q9H8G1 570 aaPredicted RBP9.78□□□□□ -0.84
SKA1-203ENST00000417656 MCUBQ9NWR8 336 aa9.78□□□□□ -0.84
SKA1-203ENST00000417656 A0A1W2PN81 502 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 CREBL2O60519 120 aaPredicted RBP9.77□□□□□ -0.85
SKA1-203ENST00000417656 OR2A4O95047 310 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 HPRT1P00492 218 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 IGHG4P01861 327 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 RPA2P15927 270 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 PPIFP30405 207 aaKnown RBP9.77□□□□□ -0.85
SKA1-203ENST00000417656 CHRNA7P36544 502 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 PIGPP57054 158 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 TAS2R31P59538 309 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 AP3S2P59780 193 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 RND3P61587 244 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 RPL23AP62750 156 aaKnown RBP9.77□□□□□ -0.85
SKA1-203ENST00000417656 TEX38Q6PEX7 206 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 UNQ5815/PRO19632Q6UWF5 114 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 TOMM5Q8N4H5 51 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 VSTM2AQ8TAG5 236 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 CD300LFQ8TDQ1 290 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms