RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 TGFBR3Q03167 851 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 GPM6BQ13491 265 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 TMEM14EPQ6UXP3 125 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 PRR22Q8IZ63 422 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 OSR2Q8N2R0 312 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 OR2Z1Q8NG97 314 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 OR5A1Q8NGJ0 315 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 OR2K2Q8NGT1 345 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 OR1F12Q8NHA8 337 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 CT55Q8WUE5 264 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 LSM10Q969L4 123 aaKnown RBP5.36□□□□□ -1.55
CCNT1-202ENST00000417344 C10orf35Q96D05 121 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 NXF5Q9H1B4 397 aaKnown RBP5.36□□□□□ -1.55
CCNT1-202ENST00000417344 ZNF442Q9H7R0 627 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 GP6Q9HCN6 339 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 PRTFDC1Q9NRG1 225 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 WNT6Q9Y6F9 365 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 COL4A6Q14031 1691 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 GOLGA4Q13439 2230 aaKnown RBP5.36□□□□□ -1.55
CCNT1-202ENST00000417344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.36□□□□□ -1.55
CCNT1-202ENST00000417344 PSMB11A5LHX3 300 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 GAGE12HA6NDE8 117 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 H3BRM9 83 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 TUSC2O75896 110 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 EML2O95834 649 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 CISD3P0C7P0 127 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 PVRP15151 417 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 GPM6AP51674 278 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 TFF3Q07654 80 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 PDCD1Q15116 288 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 CD300EQ496F6 205 aaPredicted RBP5.36□□□□□ -1.55
CCNT1-202ENST00000417344 CCDC144NLQ6NUI1 221 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 Q6ZS49 121 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 MRPL21Q7Z2W9 205 aaKnown RBP5.36□□□□□ -1.55
CCNT1-202ENST00000417344 DTX1Q86Y01 620 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 KIR3DL3Q8N743 410 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 OR10AG1Q8NH19 301 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 OR51H1Q8NH63 302 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 OR1L1Q8NH94 360 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 RAB1CQ92928 201 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 TMEM45BQ96B21 275 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 ZNF479Q96JC4 524 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 TBC1D29Q9UFV1 150 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 PPP1R3CQ9UQK1 317 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 SLC17A4Q9Y2C5 497 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 LY96Q9Y6Y9 160 aa5.36□□□□□ -1.55
CCNT1-202ENST00000417344 ARID1BQ8NFD5 2236 aaPredicted RBP5.36□□□□□ -1.55
CCNT1-202ENST00000417344 POLR2AP24928 1970 aaKnown RBP5.36□□□□□ -1.55
CCNT1-202ENST00000417344 SNRNP200O75643 2136 aaKnown RBP5.36□□□□□ -1.55
CCNT1-202ENST00000417344 IGKV1-27A0A075B6S5 117 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 TEX48A0A1B0GUV7 120 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 XIRP2A4UGR9 3374 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 C9JCJ5 164 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 H3BUT2 72 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 K7EQM0 130 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 F2RL2O00254 374 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 CLDN1O95832 211 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 SCTP09683 121 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 FTH1P19P0C7X4 201 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 HTR1DP28221 377 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 CLRN1P58418 232 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 SLC35B1P78383 322 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 RPL24P83731 157 aaKnown RBP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 MFAP5Q13361 173 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 C1orf122Q6ZSJ8 110 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 MTURNQ8N3F0 131 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 MRAP2Q96G30 205 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 FER1L6-AS2Q96M78 137 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 NUDT22Q9BRQ3 303 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 TMEM204Q9BSN7 226 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 PHF7Q9BWX1 381 aaPredicted RBP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 GEMIN7Q9H840 131 aaKnown RBP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 WDR54Q9H977 334 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 C1RLQ9NZP8 487 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 ZNF835Q9Y2P0 537 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 TSSC4Q9Y5U2 329 aaPredicted RBP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 OBSL1O75147 1896 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 TRAV38-1A0A0B4J264 116 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 IGKV1-12A0A0C4DH73 117 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 A0A0G2JLM5 398 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 SPAARA0A1B0GVQ0 90 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 A0A1W2PPV4 95 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 A0A1W2PQD3 144 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 TMEM189A5PLL7 270 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 FRG2CA6NGY1 282 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 F5H5K5 113 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 IGKV1D-12P01611 117 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 CYC1P08574 325 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 HIST1H1EP10412 219 aaKnown RBP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 USF1P22415 310 aaPredicted RBP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 MEF2CQ06413 473 aaPredicted RBP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 KLF5Q13887 457 aaPredicted RBP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 SRSF7Q16629 238 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 TMEM97Q5BJF2 176 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 RNASEKQ6P5S7 137 aaKnown RBP5.35□□□□□ -1.55
CCNT1-202ENST00000417344 ZNF788Q6ZQV5 615 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 Q6ZSR3 168 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 OR2T6Q8NHC8 308 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 LMX1AQ8TE12 382 aa5.35□□□□□ -1.55
CCNT1-202ENST00000417344 PERPQ96FX8 193 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms