RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ZNF324BQ6AW86 544 aaPredicted RBP12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 TMEM14EPQ6UXP3 125 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 CST9LQ9H4G1 147 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 RPH3ALQ9UNE2 315 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 CUL9Q8IWT3 2517 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 CACNA1GO43497 2377 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 SYNGR3O43761 229 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 ZG16O60844 167 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 G6PCP35575 357 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 DUSP3P51452 185 aaPredicted RBP12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 ZNF585BQ52M93 769 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 C10orf128Q5T292 105 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 STUMQ69YW2 141 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 Q6ZSR3 168 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 ANKRD37Q7Z713 158 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 OR56B2PQ8NGI1 322 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 HSPB7Q9UBY9 170 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 hCG_38984A0A1B0GV85 526 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 A0A1W2PN81 502 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 SRIP30626 198 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 OCIAD2Q56VL3 154 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 MMD2Q8IY49 270 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 SELENOKQ9Y6D0 94 aa12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 SMG1Q96Q15 3661 aaKnown RBP12.37□□□□□ -0.43
NCKIPSD-204ENST00000416649 PCNX2A6NKB5 2137 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 A0A1W2PRS3 328 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 ODAMA1E959 279 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 TRAPPC2LH3BP13 241 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 ARL14EPLP0DKL9 152 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 CLDN15P56746 228 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 Q0VG73 95 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 PSG7Q13046 419 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 FAM27BQ5VT28 67 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 TMEM42Q69YG0 159 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 OR4A47Q6IF82 309 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 KCNIP2Q9NS61 270 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 COL8A2P25067 703 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 RAC1P63000 192 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 RPEL1Q2QD12 228 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 MRPL54Q6P161 138 aaKnown RBP12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 OR5A2Q8NGI9 324 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 CEP250Q9BV73 2442 aa12.36□□□□□ -0.43
NCKIPSD-204ENST00000416649 ZNF324O75467 553 aaPredicted RBP12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 FGFBP3Q8TAT2 258 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 BCL2L2Q92843 193 aaPredicted RBP12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 TMEM54Q969K7 222 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 CHRNA10Q9GZZ6 450 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 C17orf112F2Z3M2 114 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 PPBPP02775 128 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 CCL2P13500 99 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 PRRX1P54821 245 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 FXYD3Q14802 87 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 MKXQ8IYA7 352 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 NUDT11Q96G61 164 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 GMPPAQ96IJ6 420 aaPredicted RBP12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 DEPPQ9NTK1 212 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 LIN7CQ9NUP9 197 aaKnown RBP12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 MTCH1Q9NZJ7 389 aa12.35□□□□□ -0.43
NCKIPSD-204ENST00000416649 K7EN84 100 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 DEGS1O15121 323 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 SYNGR1O43759 233 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 CA2P00918 260 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 PTGDSP41222 190 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 LGALS4P56470 323 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 RIPPLY3P57055 190 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 FGF12P61328 243 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 ZNF808Q8N4W9 903 aaPredicted RBP12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 CLEC7AQ9BXN2 247 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 CRIM1Q9NZV1 1036 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 TNFSF11O14788 317 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 RAMP3O60896 148 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 S1PR2O95136 353 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 RPL31P62899 125 aaKnown RBP12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 Q6ZS49 121 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 TRAV30A0A087WSZ9 112 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 SLC25A53Q5H9E4 307 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 WASHC3Q9Y3C0 194 aa12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 MRPS16Q9Y3D3 137 aaKnown RBP12.34□□□□□ -0.43
NCKIPSD-204ENST00000416649 PIGBOS1A0A0B4J2F0 54 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 IGHV1-69-2A0A0G2JMI3 117 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 RNF212BA8MTL3 300 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 M0R296 226 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 GABRA2P47869 451 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 MPV17L2Q567V2 206 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 FOXL2NBQ6ZUU3 175 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 NIT1Q86X76 327 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 CORO2AQ92828 525 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 CSTL1Q9H114 145 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 C19orf25Q9UFG5 118 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 KIAA1549Q9HCM3 1950 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 OR2T8A6NH00 312 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 CLDN14O95500 239 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 PRR27Q6MZM9 219 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 VASH2Q86V25 355 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 ZC2HC1AQ96GY0 325 aa12.33□□□□□ -0.44
NCKIPSD-204ENST00000416649 ATMQ13315 3056 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 IGHV2-26A0A0B4J1V2 119 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms