RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 LINC00312Q9Y6C7 94 aa11.17□□□□□ -0.62
SSR4P1-201ENST00000415143 SPG11Q96JI7 2443 aa11.17□□□□□ -0.62
SSR4P1-201ENST00000415143 INTS1Q8N201 2190 aaKnown RBP11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 LOC105371267A0A1B0GV96 52 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 IFNA17P01571 189 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 HSPB1P04792 205 aaKnown RBP11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 CD3EP07766 207 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 DAOP14920 347 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 MRPS11P82912 194 aaKnown RBP11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 RHEBQ15382 184 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 C17orf58Q2M2W7 97 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 KHDC3LQ587J8 217 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 NCMAPQ5T1S8 102 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 NCR3LG1Q68D85 454 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 ZNF295-AS1Q8N0V1 137 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 DEFB108BQ8NET1 73 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 MBD3L1Q8WWY6 194 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 TAF15Q92804 592 aaKnown RBP eCLIP11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 C5orf30Q96GV9 206 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 CCL13Q99616 98 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 ZNF251Q9BRH9 671 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 GGACTQ9BVM4 153 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 IFI27L2Q9H2X8 130 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 DYNLRB1Q9NP97 96 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 ENY2Q9NPA8 101 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 CCDC168Q8NDH2 2452 aa11.16□□□□□ -0.62
SSR4P1-201ENST00000415143 TRGV8A0A0C4DH27 118 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 LINC00473A8K010 186 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 FAM157AC9JC47 383 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 NDUFB3O43676 98 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 ZG16O60844 167 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 GYPAP02724 150 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 THBDP07204 575 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 NDUFB7P17568 137 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 APOBEC3AP31941 199 aaPredicted RBP11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 FHITP49789 147 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 RAB11AP62491 216 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 ZNF506Q5JVG8 444 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 OR8G2PQ6IF36 304 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 RBMS3Q6XE24 437 aaKnown RBP11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 CENPVQ7Z7K6 275 aaPredicted RBP11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 OR10G4Q8NGN3 311 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 OR4C12Q96R67 309 aa11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 PRRC2CQ9Y520 2896 aaKnown RBP11.15□□□□□ -0.62
SSR4P1-201ENST00000415143 ABCA2Q9BZC7 2435 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 FAM74A7A6NL05 159 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 B9A039 149 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 NUPL2O15504 423 aaKnown RBP11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 MPDU1O75352 247 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 NDUFS6O75380 124 aaKnown RBP11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 PAX6P26367 422 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 ATP5IP56385 69 aaPredicted RBP11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 CCL8P80075 99 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 RUNX1Q01196 453 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 PMS2P11Q13670 270 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 EFNB3Q15768 340 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 RTL8BQ17RB0 113 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 FAM74A3Q4VXF1 159 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 PDLIM3Q53GG5 364 aaPredicted RBP11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 LRRC10Q5BKY1 277 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 FAM122CQ6P4D5 195 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 ZNF429Q86V71 674 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 C15orf54Q8N8G6 183 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 WFIKKN1Q96NZ8 548 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 P2RX4Q99571 388 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 KCNIP2Q9NS61 270 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 SLC39A9Q9NUM3 307 aa11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 SLC25A10Q9UBX3 287 aaPredicted RBP11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 RPUSD1Q9UJJ7 312 aaKnown RBP11.14□□□□□ -0.63
SSR4P1-201ENST00000415143 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 M0R036 132 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 GPR37O15354 613 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 NFYBP25208 207 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 NPBWR1P48145 328 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 BRWD1-AS2P59051 145 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 FLI1Q01543 452 aaPredicted RBP11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 FBXL19-AS1Q494R0 122 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 SPRNQ5BIV9 151 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 LYG1Q8N1E2 194 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 ST6GALNAC3Q8NDV1 305 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 RNASE6Q93091 150 aaKnown RBP11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 SCRT1Q9BWW7 348 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 RPS10P5Q9NQ39 176 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 HEYLQ9NQ87 328 aaPredicted RBP11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 TMEM106BQ9NUM4 274 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 FKBP11Q9NYL4 201 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 PRNDQ9UKY0 176 aa11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 DIDO1Q9BTC0 2240 aaKnown RBP11.13□□□□□ -0.63
SSR4P1-201ENST00000415143 HEATR1Q9H583 2144 aaKnown RBP11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 UBE2L5PA0A1B0GUS4 154 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 TMPRSS2O15393 492 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 CYB5BO43169 146 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 IFNA10P01566 189 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 FGF7P21781 194 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 CHRNB4P30926 498 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 CA7P43166 264 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 OR2B8PP59922 312 aa11.12□□□□□ -0.63
SSR4P1-201ENST00000415143 RPL31P62899 125 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms