RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 NDRG3Q9UGV2 375 aa20.16■□□□□ 0.82
VRK2-202ENST00000412104 TNFRSF13BO14836 293 aaPredicted RBP20.15■□□□□ 0.82
VRK2-202ENST00000412104 PLAUP00749 431 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 SPCS3P61009 180 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 RAB2AP61019 212 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 ADGRG4Q8IZF6 3080 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 RBMXL1Q96E39 390 aaKnown RBP20.15■□□□□ 0.82
VRK2-202ENST00000412104 SMG1Q96Q15 3661 aaKnown RBP20.15■□□□□ 0.82
VRK2-202ENST00000412104 TRAV3A0A0B4J244 114 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 TRAV1-1A0A0B4J248 108 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 ERVFRD-1P60508 538 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 LYPD2Q6UXB3 125 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 OR10A7Q8NGE5 316 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 OR52E5Q8NH55 327 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 TIMM9Q9Y5J7 89 aa20.15■□□□□ 0.82
VRK2-202ENST00000412104 C15orf62A8K5M9 175 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 B9A039 149 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 ZNF714Q96N38 554 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 ARFGEF3Q5TH69 2177 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 PKDREJQ9NTG1 2253 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 CCL3L1P16619 93 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 ZNF726P1Q15940 193 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 HAGHQ16775 308 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 PDLIM3Q53GG5 364 aaPredicted RBP20.14■□□□□ 0.81
VRK2-202ENST00000412104 TMEM41BQ5BJD5 291 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 ZCCHC14Q8WYQ9 949 aaKnown RBP20.14■□□□□ 0.81
VRK2-202ENST00000412104 ZNRD1Q9P1U0 126 aa20.14■□□□□ 0.81
VRK2-202ENST00000412104 NDUFB3O43676 98 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 LY86O95711 162 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 ARG1P05089 322 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 OR13C7P0DN81 318 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 DAOP14920 347 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 ELLP55199 621 aaPredicted RBP20.13■□□□□ 0.81
VRK2-202ENST00000412104 GNB2P62879 340 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 VWC2Q2TAL6 325 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 TMEM200BQ69YZ2 307 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 CENPVQ7Z7K6 275 aaPredicted RBP20.13■□□□□ 0.81
VRK2-202ENST00000412104 CLDND2Q8NHS1 167 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 CISD1Q9NZ45 108 aaKnown RBP20.13■□□□□ 0.81
VRK2-202ENST00000412104 CTSZQ9UBR2 303 aa20.13■□□□□ 0.81
VRK2-202ENST00000412104 TET2Q6N021 2002 aaPredicted RBP20.13■□□□□ 0.81
VRK2-202ENST00000412104 ADORA2A-AS1P86434 159 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 LRRC10Q5BKY1 277 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 HEPN1Q6WQI6 88 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 SSX7Q7RTT5 188 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 ZNF429Q86V71 674 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 H1FXQ92522 213 aaKnown RBP20.12■□□□□ 0.81
VRK2-202ENST00000412104 RCC1LQ96I51 464 aaKnown RBP20.12■□□□□ 0.81
VRK2-202ENST00000412104 RHOVQ96L33 236 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 AIFM2Q9BRQ8 373 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 IGHV1-69-2A0A0G2JMI3 117 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 SIAH2O43255 324 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 FGF7P21781 194 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 ICAM4Q14773 271 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 ZNF506Q5JVG8 444 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 CLCC1Q96S66 551 aa20.12■□□□□ 0.81
VRK2-202ENST00000412104 C15orf61A6NNL5 157 aa20.11■□□□□ 0.81
VRK2-202ENST00000412104 SCAF4O95104 1147 aaKnown RBP20.11■□□□□ 0.81
VRK2-202ENST00000412104 VDAC2P45880 294 aaPredicted RBP20.11■□□□□ 0.81
VRK2-202ENST00000412104 HNF4GQ14541 408 aa20.11■□□□□ 0.81
VRK2-202ENST00000412104 OR4A47Q6IF82 309 aa20.11■□□□□ 0.81
VRK2-202ENST00000412104 MBD3L1Q8WWY6 194 aa20.11■□□□□ 0.81
VRK2-202ENST00000412104 CT45A6P0DMU7 189 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 CT45A5P0DMU8 189 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 CT45A7P0DMV0 189 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 TFF3Q07654 80 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 CDSNQ15517 529 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 AKIRIN2Q53H80 203 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 ZNF787Q6DD87 383 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 ETV3LQ6ZN32 361 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 KAAG1Q9UBP8 84 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 DVL1O14640 695 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 AWAT1Q58HT5 328 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 LCN15Q6UWW0 184 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 HEYLQ9NQ87 328 aaPredicted RBP20.1■□□□□ 0.81
VRK2-202ENST00000412104 TCF19Q9Y242 345 aa20.1■□□□□ 0.81
VRK2-202ENST00000412104 SPTA1P02549 2419 aa20.09■□□□□ 0.81
VRK2-202ENST00000412104 RPP30P78346 268 aaKnown RBP20.09■□□□□ 0.81
VRK2-202ENST00000412104 POU2AF1Q16633 256 aa20.09■□□□□ 0.81
VRK2-202ENST00000412104 ACSM6Q6P461 480 aa20.09■□□□□ 0.81
VRK2-202ENST00000412104 IFNA10P01566 189 aa20.08■□□□□ 0.81
VRK2-202ENST00000412104 SRP19P09132 144 aaKnown RBP20.08■□□□□ 0.81
VRK2-202ENST00000412104 C1QTNF9P0C862 333 aa20.08■□□□□ 0.81
VRK2-202ENST00000412104 LOXP28300 417 aaPredicted RBP20.08■□□□□ 0.81
VRK2-202ENST00000412104 SOHLH1Q5JUK2 328 aa20.08■□□□□ 0.81
VRK2-202ENST00000412104 ZNF833PQ6ZTB9 187 aa20.08■□□□□ 0.81
VRK2-202ENST00000412104 RXFP4Q8TDU9 374 aa20.08■□□□□ 0.81
VRK2-202ENST00000412104 NPCDR1Q9BY65 106 aa20.08■□□□□ 0.81
VRK2-202ENST00000412104 FOXA2Q9Y261 457 aaPredicted RBP20.08■□□□□ 0.81
VRK2-202ENST00000412104 SPTBN4Q9H254 2564 aa20.08■□□□□ 0.81
VRK2-202ENST00000412104 HRASP01112 189 aa20.08■□□□□ 0.8
VRK2-202ENST00000412104 IGKV1D-33P01593 117 aa20.08■□□□□ 0.8
VRK2-202ENST00000412104 IGKV1-33P01594 117 aa20.08■□□□□ 0.8
VRK2-202ENST00000412104 HSPB1P04792 205 aaKnown RBP20.08■□□□□ 0.8
VRK2-202ENST00000412104 MDKP21741 143 aaPredicted RBP20.08■□□□□ 0.8
VRK2-202ENST00000412104 HOXA1P49639 335 aaPredicted RBP20.08■□□□□ 0.8
VRK2-202ENST00000412104 HFEQ30201 348 aa20.08■□□□□ 0.8
VRK2-202ENST00000412104 MUC15Q8N387 334 aa20.08■□□□□ 0.8
VRK2-202ENST00000412104 SLC35D1Q9NTN3 355 aa20.08■□□□□ 0.8
VRK2-202ENST00000412104 TMEM14BQ9NUH8 114 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms