RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 CLDN34H7C241 214 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 RAMP3O60896 148 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 IGKV1-16P04430 117 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 TMEM11P17152 192 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 TATDN3Q17R31 274 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 VMA21Q3ZAQ7 101 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 Q8N6K4 173 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 TEX45Q8NA69 505 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 NPBQ8NG41 125 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 OR4A5Q8NH83 315 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 RRNAD1Q96FB5 475 aaKnown RBP14.96□□□□□ -0.01
CDC42-204ENST00000411827 RHOVQ96L33 236 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 TMED3Q9Y3Q3 217 aa14.96□□□□□ -0.01
CDC42-204ENST00000411827 SONP18583 2426 aaKnown RBP14.96□□□□□ -0.01
CDC42-204ENST00000411827 DNHD1Q96M86 4753 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 H3BUX3 64 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 OR2F2O95006 317 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 VDAC1P21796 283 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 RIPPLY3P57055 190 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 LINC00205P59089 165 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 UBE2KP61086 200 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 RPL15P61313 204 aaKnown RBP14.95□□□□□ -0.02
CDC42-204ENST00000411827 SLC9A3R2Q15599 337 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 SP6Q3SY56 376 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 OR2B11Q5JQS5 317 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 C12orf45Q8N5I9 185 aaPredicted RBP14.95□□□□□ -0.02
CDC42-204ENST00000411827 SIGLECL1Q8N7X8 197 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 PIFOQ8TCI5 191 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 CASTOR1Q8WTX7 329 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 LSM10Q969L4 123 aaKnown RBP14.95□□□□□ -0.02
CDC42-204ENST00000411827 RBM14Q96PK6 669 aaKnown RBP14.95□□□□□ -0.02
CDC42-204ENST00000411827 VPREB3Q9UKI3 123 aa14.95□□□□□ -0.02
CDC42-204ENST00000411827 A6NDX4 124 aa14.94□□□□□ -0.02
CDC42-204ENST00000411827 MARCH11A6NNE9 402 aa14.94□□□□□ -0.02
CDC42-204ENST00000411827 FGF16O43320 207 aa14.94□□□□□ -0.02
CDC42-204ENST00000411827 IFNA21P01568 189 aa14.94□□□□□ -0.02
CDC42-204ENST00000411827 TMEM268Q5VZI3 342 aa14.94□□□□□ -0.02
CDC42-204ENST00000411827 DMBX1Q8NFW5 382 aa14.94□□□□□ -0.02
CDC42-204ENST00000411827 R3HDM4Q96D70 268 aa14.94□□□□□ -0.02
CDC42-204ENST00000411827 ZNF48Q96MX3 618 aaPredicted RBP14.94□□□□□ -0.02
CDC42-204ENST00000411827 BEX1Q9HBH7 125 aa14.94□□□□□ -0.02
CDC42-204ENST00000411827 NBR2O15453 112 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 S1PR2O95136 353 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 NDUFA3O95167 84 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 IGHV4-59P01825 116 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 AKR1C2P52895 323 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 MMDQ15546 238 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 H2BFWTQ7Z2G1 175 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 SELENOHQ8IZQ5 122 aaKnown RBP14.93□□□□□ -0.02
CDC42-204ENST00000411827 BET1LQ9NYM9 111 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 MOB4Q9Y3A3 225 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 MMP24Q9Y5R2 645 aa14.93□□□□□ -0.02
CDC42-204ENST00000411827 RRHO14718 337 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 OR2A4O95047 310 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 KRASP01116 189 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 SLC25A6P12236 298 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 ANKRD55Q3KP44 614 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 LIN54Q6MZP7 749 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 Q71RC1 249 aaPredicted RBP14.92□□□□□ -0.02
CDC42-204ENST00000411827 RNASE11Q8TAA1 199 aaKnown RBP14.92□□□□□ -0.02
CDC42-204ENST00000411827 SEC22AQ96IW7 307 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 OR2A7Q96R45 310 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 SPIN2AQ99865 258 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 SPIN2BQ9BPZ2 258 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 SEC22CQ9BRL7 303 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 OR51J1Q9H342 316 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 FKBP11Q9NYL4 201 aa14.92□□□□□ -0.02
CDC42-204ENST00000411827 SOX21Q9Y651 276 aaPredicted RBP14.92□□□□□ -0.02
CDC42-204ENST00000411827 MDFIC2A0A1B0GVS7 189 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 DBX1A6NMT0 343 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 HOXA3O43365 443 aaPredicted RBP14.91□□□□□ -0.02
CDC42-204ENST00000411827 SNAPC5O75971 98 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 HLA-GP17693 338 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 PAX6P26367 422 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 MAS1LP35410 378 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 HILS1P60008 231 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 HNF4GQ14541 408 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 PSG5Q15238 335 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 Q6ZNX1 250 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 SLC25A33Q9BSK2 321 aa14.91□□□□□ -0.02
CDC42-204ENST00000411827 A0A1B0GU03 582 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 NCBP2LA6PVI3 153 aaKnown RBP14.9□□□□□ -0.02
CDC42-204ENST00000411827 SSNA1O43805 119 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 IGKV1-39P01597 117 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 IGLV2-23P01705 113 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 IGKV1D-39P04432 117 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 CD24P25063 80 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 C5orf64Q2M2E5 130 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 PPP1R27Q86WC6 154 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 MMD2Q8IY49 270 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 PUSL1Q8N0Z8 303 aaKnown RBP14.9□□□□□ -0.02
CDC42-204ENST00000411827 SLC35G3Q8N808 338 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 TMEM167AQ8TBQ9 72 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 RASL11BQ9BPW5 248 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 PLSCR3Q9NRY6 295 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 COA4Q9NYJ1 87 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 PRNDQ9UKY0 176 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 ALG5Q9Y673 324 aa14.9□□□□□ -0.02
CDC42-204ENST00000411827 NSD1Q96L73 2696 aaPredicted RBP14.9□□□□□ -0.02
CDC42-204ENST00000411827 SRRM4A7MD48 611 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms