RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SLC25A42Q86VD7 318 aa12.58□□□□□ -0.4
MRPL55-220ENST00000411464 TTC9CQ8N5M4 171 aa12.58□□□□□ -0.4
MRPL55-220ENST00000411464 RAB3CQ96E17 227 aa12.58□□□□□ -0.4
MRPL55-220ENST00000411464 DCUN1D5Q9BTE7 237 aa12.58□□□□□ -0.4
MRPL55-220ENST00000411464 ZNF430Q9H8G1 570 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-220ENST00000411464 ZC4H2Q9NQZ6 224 aa12.58□□□□□ -0.4
MRPL55-220ENST00000411464 RAB22AQ9UL26 194 aa12.58□□□□□ -0.4
MRPL55-220ENST00000411464 KCNK7Q9Y2U2 307 aa12.58□□□□□ -0.4
MRPL55-220ENST00000411464 LSM2Q9Y333 95 aaKnown RBP12.58□□□□□ -0.4
MRPL55-220ENST00000411464 PPP5D1E7EU14 171 aa12.57□□□□□ -0.4
MRPL55-220ENST00000411464 GGCTO75223 188 aaKnown RBP12.57□□□□□ -0.4
MRPL55-220ENST00000411464 OR2J3O76001 311 aa12.57□□□□□ -0.4
MRPL55-220ENST00000411464 OR2C1O95371 312 aa12.57□□□□□ -0.4
MRPL55-220ENST00000411464 DUTP33316 252 aaKnown RBP12.57□□□□□ -0.4
MRPL55-220ENST00000411464 MMD2Q8IY49 270 aa12.57□□□□□ -0.4
MRPL55-220ENST00000411464 LINC00476Q8WZB0 136 aa12.57□□□□□ -0.4
MRPL55-220ENST00000411464 DDB2Q92466 427 aa12.57□□□□□ -0.4
MRPL55-220ENST00000411464 WDR89Q96FK6 387 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-220ENST00000411464 CENPOQ9BU64 300 aa12.57□□□□□ -0.4
MRPL55-220ENST00000411464 LINC00473A8K010 186 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 LGALS9O00182 355 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 LY6G6CO95867 125 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 HLA-AP01891 365 aaKnown RBP12.56□□□□□ -0.4
MRPL55-220ENST00000411464 CBLN1P23435 193 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 PSMD7P51665 324 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 CDK10Q15131 360 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 TRAM1Q15629 374 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 TMEM91Q6ZNR0 172 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 MAFIPQ8WZ33 124 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 SCN3BQ9NY72 215 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 RAB26Q9ULW5 256 aa12.56□□□□□ -0.4
MRPL55-220ENST00000411464 TMEM272A0A1B0GTI8 110 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 HSMCR30P0CW71 290 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 SAA1P0DJI8 122 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-220ENST00000411464 EDN2P20800 178 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 GADD45AP24522 165 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 MAP2K4P45985 399 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 GPHB5Q86YW7 130 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 GGTLC1Q9BX51 225 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 FBXL7Q9UJT9 491 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 ZNF257Q9Y2Q1 563 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 V9GY05 133 aa12.55□□□□□ -0.4
MRPL55-220ENST00000411464 A0A075B6Q4 140 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 ZNF320A2RRD8 509 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 DPPA5A6NC42 116 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 CXorf65A6NEN9 183 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 FCGR3BO75015 233 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 GNB3P16520 340 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 PSMA1P25786 263 aaKnown RBP12.54□□□□□ -0.4
MRPL55-220ENST00000411464 CALRP27797 417 aaKnown RBP12.54□□□□□ -0.4
MRPL55-220ENST00000411464 TALDO1P37837 337 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 RPS25P62851 125 aaKnown RBP12.54□□□□□ -0.4
MRPL55-220ENST00000411464 PLA2G7Q13093 441 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 ANKRD55Q3KP44 614 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 FAM106AQ4KMX7 169 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 C10orf55Q5SWW7 151 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 ZNF57Q68EA5 555 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-220ENST00000411464 OR52B4Q8NGK2 314 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 OR10R2Q8NGX6 335 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 ST6GALNAC5Q9BVH7 336 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 PRELID3BQ9Y3B1 194 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 DMRT1Q9Y5R6 373 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 SELENOKQ9Y6D0 94 aa12.54□□□□□ -0.4
MRPL55-220ENST00000411464 LOC102724200A0A096LPH7 203 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-220ENST00000411464 HMX3A6NHT5 357 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 ARL3P36405 182 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 ARFRP1Q13795 201 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 HES5Q5TA89 166 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 H1FOOQ8IZA3 346 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-220ENST00000411464 TMEM61Q8N0U2 210 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 CACNG8Q8WXS5 425 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 CNBD2Q96M20 576 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 OVOL2Q9BRP0 275 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 OR51E2Q9H255 320 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 Q9H521 79 aa12.53□□□□□ -0.4
MRPL55-220ENST00000411464 J3QRK9 145 aa12.52□□□□□ -0.41
MRPL55-220ENST00000411464 IGHV3-23P01764 117 aa12.52□□□□□ -0.41
MRPL55-220ENST00000411464 PMS2P11Q13670 270 aa12.52□□□□□ -0.41
MRPL55-220ENST00000411464 IRF3Q14653 427 aa12.52□□□□□ -0.41
MRPL55-220ENST00000411464 CLEC19AQ6UXS0 136 aa12.52□□□□□ -0.41
MRPL55-220ENST00000411464 ZNF645Q8N7E2 425 aa12.52□□□□□ -0.41
MRPL55-220ENST00000411464 MRPS7Q9Y2R9 242 aaKnown RBP12.52□□□□□ -0.41
MRPL55-220ENST00000411464 NUPR2A6NF83 97 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 NPIPB5A8MRT5 1133 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 MFNGO00587 321 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 SCAF4O95104 1147 aaKnown RBP12.51□□□□□ -0.41
MRPL55-220ENST00000411464 DHFRP00374 187 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 HIST1H1DP16402 221 aaKnown RBP12.51□□□□□ -0.41
MRPL55-220ENST00000411464 CD36P16671 472 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 FABP5Q01469 135 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 OR2B11Q5JQS5 317 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 OR4A47Q6IF82 309 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 Q6ZS49 121 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 KCTD9Q7L273 389 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 VKORC1L1Q8N0U8 176 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 UXS1Q8NBZ7 420 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 VSTM2AQ8TAG5 236 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 FYTTD1Q96QD9 318 aaKnown RBP12.51□□□□□ -0.41
MRPL55-220ENST00000411464 ACOT13Q9NPJ3 140 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 SLC2A9Q9NRM0 540 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms