RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 A0A1W2PN81 502 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 SOX15O60248 233 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 SLC6A1P30531 599 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 CHRNA7P36544 502 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 KIR2DS2P43631 304 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 DGCR2P98153 550 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 ACTBL2Q562R1 376 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 ZNF695Q8IW36 515 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 BORCS5Q969J3 196 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 DIRAS2Q96HU8 199 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 KLK15Q9H2R5 256 aa24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 FOXA2Q9Y261 457 aaPredicted RBP24.33■■□□□ 1.49
TRAF3IP1-203ENST00000409739 TSPAN5P62079 268 aa24.32■■□□□ 1.48
TRAF3IP1-203ENST00000409739 TMEM267Q0VDI3 215 aaPredicted RBP24.32■■□□□ 1.48
TRAF3IP1-203ENST00000409739 CATR1Q13166 79 aa24.32■■□□□ 1.48
TRAF3IP1-203ENST00000409739 VAX1Q5SQQ9 334 aa24.32■■□□□ 1.48
TRAF3IP1-203ENST00000409739 UNQ5815/PRO19632Q6UWF5 114 aa24.32■■□□□ 1.48
TRAF3IP1-203ENST00000409739 LFNGQ8NES3 379 aa24.32■■□□□ 1.48
TRAF3IP1-203ENST00000409739 FCAMRQ8WWV6 532 aa24.32■■□□□ 1.48
TRAF3IP1-203ENST00000409739 RSL24D1Q9UHA3 163 aaKnown RBP24.32■■□□□ 1.48
TRAF3IP1-203ENST00000409739 M0QYG6 137 aa24.31■■□□□ 1.48
TRAF3IP1-203ENST00000409739 CNIH1O95406 144 aa24.31■■□□□ 1.48
TRAF3IP1-203ENST00000409739 CDX1P47902 265 aaPredicted RBP24.31■■□□□ 1.48
TRAF3IP1-203ENST00000409739 PRSS8Q16651 343 aa24.31■■□□□ 1.48
TRAF3IP1-203ENST00000409739 AKIRIN2Q53H80 203 aa24.31■■□□□ 1.48
TRAF3IP1-203ENST00000409739 MCFD2Q8NI22 146 aa24.31■■□□□ 1.48
TRAF3IP1-203ENST00000409739 GABARAPH6UMI1 98 aa24.3■■□□□ 1.48
TRAF3IP1-203ENST00000409739 RAMP3O60896 148 aa24.3■■□□□ 1.48
TRAF3IP1-203ENST00000409739 PYHIN1Q6K0P9 492 aa24.3■■□□□ 1.48
TRAF3IP1-203ENST00000409739 VKORC1L1Q8N0U8 176 aa24.3■■□□□ 1.48
TRAF3IP1-203ENST00000409739 SPAG16Q8N0X2 631 aa24.3■■□□□ 1.48
TRAF3IP1-203ENST00000409739 OR51H1Q8NH63 302 aa24.3■■□□□ 1.48
TRAF3IP1-203ENST00000409739 MRPS10P82664 201 aaKnown RBP24.29■■□□□ 1.48
TRAF3IP1-203ENST00000409739 IL18Q14116 193 aa24.29■■□□□ 1.48
TRAF3IP1-203ENST00000409739 KIAA0141Q14154 515 aaPredicted RBP24.29■■□□□ 1.48
TRAF3IP1-203ENST00000409739 AADACL3Q5VUY0 350 aa24.29■■□□□ 1.48
TRAF3IP1-203ENST00000409739 TMEM65Q6PI78 240 aa24.29■■□□□ 1.48
TRAF3IP1-203ENST00000409739 TINAGL1Q9GZM7 467 aaPredicted RBP24.29■■□□□ 1.48
TRAF3IP1-203ENST00000409739 ZNF430Q9H8G1 570 aaPredicted RBP24.29■■□□□ 1.48
TRAF3IP1-203ENST00000409739 ZNF701M0R085 212 aaPredicted RBP24.28■■□□□ 1.48
TRAF3IP1-203ENST00000409739 RBFOX2O43251 390 aaKnown RBP eCLIP24.28■■□□□ 1.48
TRAF3IP1-203ENST00000409739 CD3DP04234 171 aa24.28■■□□□ 1.48
TRAF3IP1-203ENST00000409739 RNASE10Q5GAN6 216 aaKnown RBP24.28■■□□□ 1.48
TRAF3IP1-203ENST00000409739 CASTOR1Q8WTX7 329 aa24.28■■□□□ 1.48
TRAF3IP1-203ENST00000409739 SMIM4Q8WVI0 70 aa24.28■■□□□ 1.48
TRAF3IP1-203ENST00000409739 RABL2AQ9UBK7 228 aaPredicted RBP24.28■■□□□ 1.48
TRAF3IP1-203ENST00000409739 RABL2BQ9UNT1 228 aa24.28■■□□□ 1.48
TRAF3IP1-203ENST00000409739 RLN1P04808 185 aa24.27■■□□□ 1.48
TRAF3IP1-203ENST00000409739 CD33P20138 364 aa24.27■■□□□ 1.48
TRAF3IP1-203ENST00000409739 TBPP20226 339 aa24.27■■□□□ 1.48
TRAF3IP1-203ENST00000409739 RAB9AP51151 201 aa24.27■■□□□ 1.48
TRAF3IP1-203ENST00000409739 TNXAQ16473 311 aa24.27■■□□□ 1.48
TRAF3IP1-203ENST00000409739 C1QL4Q86Z23 238 aa24.27■■□□□ 1.48
TRAF3IP1-203ENST00000409739 ZNF491Q8N8L2 437 aa24.27■■□□□ 1.48
TRAF3IP1-203ENST00000409739 OR5M8Q8NGP6 311 aa24.27■■□□□ 1.48
TRAF3IP1-203ENST00000409739 C4orf3Q8WVX3 66 aa24.27■■□□□ 1.48
TRAF3IP1-203ENST00000409739 G3V4G9 280 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 GPR31O00270 319 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 CTDSPLO15194 276 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 CREBL2O60519 120 aaPredicted RBP24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 PGLYRP1O75594 196 aaPredicted RBP24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 TNFSF8P32971 234 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 SSBP1Q04837 148 aaKnown RBP24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 DEFB136Q30KP8 78 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 PUSL1Q8N0Z8 303 aaKnown RBP24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 LINC00482Q8N8I6 264 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 TMEM229BQ8NBD8 167 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 WFDC9Q8NEX5 89 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 RAX2Q96IS3 184 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 RHOVQ96L33 236 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 DUX3Q96PT4 197 aa24.26■■□□□ 1.47
TRAF3IP1-203ENST00000409739 KBTBD11O94819 623 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 HRASP01112 189 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 SAMD5Q5TGI4 173 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 ASPHD1Q5U4P2 390 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 MRPL41Q8IXM3 137 aaKnown RBP24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 MMD2Q8IY49 270 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 CMTM1Q8IZ96 169 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 OR4D10Q8NGI6 311 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 VSTM2AQ8TAG5 236 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 SRSF12Q8WXF0 261 aaKnown RBP24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 UBE2E2Q96LR5 201 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 P2RX4Q99571 388 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 GNB4Q9HAV0 340 aa24.25■■□□□ 1.47
TRAF3IP1-203ENST00000409739 OR2A4O95047 310 aa24.24■■□□□ 1.47
TRAF3IP1-203ENST00000409739 CD74P04233 296 aa24.24■■□□□ 1.47
TRAF3IP1-203ENST00000409739 IFNA6P05013 189 aa24.24■■□□□ 1.47
TRAF3IP1-203ENST00000409739 MYCNOSP40205 109 aa24.24■■□□□ 1.47
TRAF3IP1-203ENST00000409739 TAS2R19P59542 299 aa24.24■■□□□ 1.47
TRAF3IP1-203ENST00000409739 SSX9Q7RTT3 188 aa24.24■■□□□ 1.47
TRAF3IP1-203ENST00000409739 ARRDC1Q8N5I2 433 aa24.24■■□□□ 1.47
TRAF3IP1-203ENST00000409739 OR2A7Q96R45 310 aa24.24■■□□□ 1.47
TRAF3IP1-203ENST00000409739 RSRP1Q9BUV0 290 aa24.24■■□□□ 1.47
TRAF3IP1-203ENST00000409739 CCL24O00175 119 aa24.23■■□□□ 1.47
TRAF3IP1-203ENST00000409739 HPRT1P00492 218 aa24.23■■□□□ 1.47
TRAF3IP1-203ENST00000409739 UCP3P55916 312 aa24.23■■□□□ 1.47
TRAF3IP1-203ENST00000409739 PHLDA2Q53GA4 152 aa24.23■■□□□ 1.47
TRAF3IP1-203ENST00000409739 C10orf55Q5SWW7 151 aa24.23■■□□□ 1.47
TRAF3IP1-203ENST00000409739 LPCAT3Q6P1A2 487 aa24.23■■□□□ 1.47
TRAF3IP1-203ENST00000409739 LHFPL1Q86WI0 220 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms