RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 WSB1Q9Y6I7 421 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 PKDREJQ9NTG1 2253 aa12.62□□□□□ -0.39
SCAMP4-202ENST00000409472 A0A1B0GW64 132 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 M0QZK8 103 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 GGCTO75223 188 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 DFFBO76075 338 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 CXCL1P09341 107 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 TRGC1P0CF51 173 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 OR13C7P0DN81 318 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 RPS16P62249 146 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 RPL23AP62750 156 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 SPINK9Q5DT21 86 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 SPACA3Q8IXA5 215 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 LEAP2Q969E1 77 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 RAB40CQ96S21 281 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 STRAPQ9Y3F4 350 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 ATXN7O15265 892 aaPredicted RBP12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 GCGP01275 180 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 TAGLN2P37802 199 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 EDDM3BP56851 147 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 SPANXN5Q5MJ07 72 aa12.61□□□□□ -0.39
SCAMP4-202ENST00000409472 CYB5R3P00387 301 aaPredicted RBP12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 CD40P25942 277 aa12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 KRTCAP3Q53RY4 240 aa12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 THNSL2Q86YJ6 484 aa12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 ZDHHC16Q969W1 377 aa12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 SCNM1Q9BWG6 230 aa12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 FAM234AQ9H0X4 552 aa12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 RBKSQ9H477 322 aa12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 VSIRQ9H7M9 311 aa12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 CLN8Q9UBY8 286 aa12.6□□□□□ -0.39
SCAMP4-202ENST00000409472 RNF212BA8MTL3 300 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 CLDN1O95832 211 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 LHBP01229 141 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 IGHV1-46P01743 117 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 HCFC1P51610 2035 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 ZNF134P52741 427 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 UBE2KP61086 200 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 ZCCHC24Q8N2G6 241 aaKnown RBP12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 ZNF525Q8N782 197 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 RPLP1P05386 114 aaKnown RBP12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 RPL39P5Q59GN2 51 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 NCR3LG1Q68D85 454 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 MRPL52Q86TS9 123 aaKnown RBP12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 TMEM183AQ8IXX5 376 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 C1orf174Q8IYL3 243 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 DEFB108BQ8NET1 73 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 SNRNP40Q96DI7 357 aaKnown RBP12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 GCM1Q9NP62 436 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 TANC2Q9HCD6 1990 aa12.59□□□□□ -0.39
SCAMP4-202ENST00000409472 DYSFO75923 2080 aa12.58□□□□□ -0.39
SCAMP4-202ENST00000409472 SPINT2O43291 252 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 SSX7Q7RTT5 188 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 WFDC8Q8IUA0 241 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 Q8TCH9 128 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 OR4C12Q96R67 309 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 GNG12Q9UBI6 72 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 CD55P08174 381 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 CFHR2P36980 270 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 LOXL3P58215 753 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 TAS2R30P59541 319 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 PAX5Q02548 391 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 FAM90A1Q86YD7 464 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 RAB39BQ96DA2 213 aa12.58□□□□□ -0.4
SCAMP4-202ENST00000409472 TGIF2-C20orf24A0A0A6YYL0 155 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 ZNF727A8MUV8 499 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 ZNF705GA8MUZ8 300 aaPredicted RBP12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 H3BQ15 152 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 MGST3O14880 152 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 ERVFRD-1P60508 538 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 RPP30P78346 268 aaKnown RBP12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 TNFAIP6P98066 277 aaPredicted RBP12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 MZT1Q08AG7 82 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 CATR1Q13166 79 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 SP5Q6BEB4 398 aaPredicted RBP12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 OR8G2PQ6IF36 304 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 ZNF343Q6P1L6 599 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 TCF23Q7RTU1 214 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 C1orf87Q8N0U7 546 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 ZBTB34Q8NCN2 500 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 FRZBQ92765 325 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 RCC1LQ96I51 464 aaKnown RBP12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 SNX22Q96L94 193 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 HSPB7Q9UBY9 170 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 URGCP-MRPS24S4R325 110 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 DCHS2Q6V1P9 2916 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 LRBAP50851 2863 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 LRRC30A6NM36 301 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 SOX15O60248 233 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 ZG16O60844 167 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 THBDP07204 575 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 TBR1Q16650 682 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 HAGHQ16775 308 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 MORN2Q502X0 79 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 SLC25A24Q6NUK1 477 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 VKORC1L1Q8N0U8 176 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 FAM216BQ8N7L0 139 aa12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 GNPNAT1Q96EK6 184 aaPredicted RBP12.57□□□□□ -0.4
SCAMP4-202ENST00000409472 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms