RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 C6orf15Q6UXA7 325 aaPredicted RBP10.16□□□□□ -0.78
HMGB1-206ENST00000405805 KCNE4Q8WWG9 221 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 RTL8AQ9BWD3 113 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 ANGPTL4Q9BY76 406 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 FBLN5Q9UBX5 448 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 NPIPB13A6NJU9 1138 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 NPIPB4C9JG80 1138 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 C11orf94C9JXX5 98 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 K7ESF4 209 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 UMODP07911 640 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 MPZP25189 248 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 PMELP40967 661 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 HES3Q5TGS1 186 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 C12orf54Q6X4T0 127 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 TCF23Q7RTU1 214 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 GALMQ96C23 342 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 TCFL5Q9UL49 500 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.16□□□□□ -0.78
HMGB1-206ENST00000405805 A0A1B0GUS0 222 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 C17orf112F2Z3M2 114 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 K7N7A8 449 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 SYNGR3O43761 229 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 ENSAO43768 121 aaKnown RBP10.16□□□□□ -0.78
HMGB1-206ENST00000405805 OR1C1Q15619 314 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 TM4SF20Q53R12 229 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 MUC15Q8N387 334 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 ZIC4Q8N9L1 334 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 OR2T6Q8NHC8 308 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 SIGMAR1Q99720 223 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 VPS13AQ96RL7 3174 aa10.16□□□□□ -0.78
HMGB1-206ENST00000405805 A6NDN8 102 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 NKX6-3A6NJ46 265 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 PTGDSP41222 190 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 ZNF841Q6ZN19 808 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 C1orf210Q8IVY1 113 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 OR1N2Q8NGR9 330 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 TMEM191AQ9H0A3 160 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 ZFHX2Q9C0A1 2572 aaPredicted RBP10.15□□□□□ -0.78
HMGB1-206ENST00000405805 IGHV1-45A0A0A0MS14 117 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 TBC1D28Q2M2D7 210 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 ANKRD39Q53RE8 183 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 ANAPC16Q96DE5 110 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 HSPB7Q9UBY9 170 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 A0A1W2PN81 502 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 CHEK1O14757 476 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 CCL11P51671 97 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 HOXA4Q00056 320 aaPredicted RBP10.15□□□□□ -0.78
HMGB1-206ENST00000405805 ICAM4Q14773 271 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 TNFRSF14Q92956 283 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 MRPL18Q9H0U6 180 aaKnown RBP10.15□□□□□ -0.78
HMGB1-206ENST00000405805 PILRBQ9UKJ0 227 aa10.15□□□□□ -0.78
HMGB1-206ENST00000405805 TBL2Q9Y4P3 447 aaKnown RBP10.15□□□□□ -0.78
HMGB1-206ENST00000405805 TRAV38-1A0A0B4J264 116 aa10.15□□□□□ -0.79
HMGB1-206ENST00000405805 H3BUT2 72 aa10.15□□□□□ -0.79
HMGB1-206ENST00000405805 SERF1AO75920 110 aa10.15□□□□□ -0.79
HMGB1-206ENST00000405805 PLA2G5P39877 138 aa10.15□□□□□ -0.79
HMGB1-206ENST00000405805 RSPO1Q2MKA7 263 aaPredicted RBP10.15□□□□□ -0.79
HMGB1-206ENST00000405805 SMIM21Q3B7S5 101 aa10.15□□□□□ -0.79
HMGB1-206ENST00000405805 SLC25A34Q6PIV7 304 aa10.15□□□□□ -0.79
HMGB1-206ENST00000405805 ZNF788Q6ZQV5 615 aa10.15□□□□□ -0.79
HMGB1-206ENST00000405805 MRGPRGQ86SM5 289 aa10.15□□□□□ -0.79
HMGB1-206ENST00000405805 GATAD1Q8WUU5 269 aa10.15□□□□□ -0.79
HMGB1-206ENST00000405805 IFNL4K9M1U5 179 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 AGFG2O95081 481 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 CA2P00918 260 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 FABP2P12104 132 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 CISD2Q8N5K1 135 aaKnown RBP10.14□□□□□ -0.79
HMGB1-206ENST00000405805 NABP1Q96AH0 204 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 C10orf35Q96D05 121 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 CHRNA10Q9GZZ6 450 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 TAAR3PQ9P1P4 343 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 PEF1Q9UBV8 284 aaKnown RBP10.14□□□□□ -0.79
HMGB1-206ENST00000405805 hCG_38984A0A1B0GV85 526 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 GAGE12BA1L429 117 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 COX6A1P12074 109 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 FGF12P61328 243 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 C1QL4Q86Z23 238 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 FGFRL1Q8N441 504 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 OR8B3Q8NGG8 313 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 UBTD1Q9HAC8 227 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 DLL3Q9NYJ7 618 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 POLR3KQ9Y2Y1 108 aaPredicted RBP10.14□□□□□ -0.79
HMGB1-206ENST00000405805 HILPDAQ9Y5L2 63 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 ATP23Q9Y6H3 246 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 OR5B21A6NL26 309 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 TNFSF13O75888 250 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 TMEM50AO95807 157 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 SRP14P37108 136 aaKnown RBP10.14□□□□□ -0.79
HMGB1-206ENST00000405805 C10orf128Q5T292 105 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 OR1L1Q8NH94 360 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 C18orf12Q96KH6 178 aa10.14□□□□□ -0.79
HMGB1-206ENST00000405805 A0A0G2JRQ6 117 aa10.13□□□□□ -0.79
HMGB1-206ENST00000405805 PGPEP1LA6NFU8 196 aa10.13□□□□□ -0.79
HMGB1-206ENST00000405805 CCL1P22362 96 aa10.13□□□□□ -0.79
HMGB1-206ENST00000405805 GPR12P47775 334 aa10.13□□□□□ -0.79
HMGB1-206ENST00000405805 LINC00205P59089 165 aa10.13□□□□□ -0.79
HMGB1-206ENST00000405805 VKORC1L1Q8N0U8 176 aa10.13□□□□□ -0.79
HMGB1-206ENST00000405805 LRFN3Q9BTN0 628 aa10.13□□□□□ -0.79
HMGB1-206ENST00000405805 SF3B5Q9BWJ5 86 aaKnown RBP10.13□□□□□ -0.79
HMGB1-206ENST00000405805 SMDT1Q9H4I9 107 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms