RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 IGKV1D-8A0A087WSZ0 117 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 HMX3A6NHT5 357 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 J3QRK9 145 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 DENRO43583 198 aaKnown RBP8.94□□□□□ -0.98
LINC00544-201ENST00000400540 TUSC2O75896 110 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 OR2C1O95371 312 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 RRASP10301 218 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 GNB3P16520 340 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 KIR2DS2P43631 304 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 PMS2P11Q13670 270 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 RCN1Q15293 331 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 OR2B11Q5JQS5 317 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 HES5Q5TA89 166 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 C8orf4Q9NR00 106 aa8.94□□□□□ -0.98
LINC00544-201ENST00000400540 TEX22C9J3V5 150 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 E7EUB6 86 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 MFNGO00587 321 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 LY6G6CO95867 125 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 HSMCR30P0CW71 290 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 CALRP27797 417 aaKnown RBP8.93□□□□□ -0.98
LINC00544-201ENST00000400540 MRPS15P82914 257 aaKnown RBP8.93□□□□□ -0.98
LINC00544-201ENST00000400540 EWSR1Q01844 656 aaKnown RBP eCLIP8.93□□□□□ -0.98
LINC00544-201ENST00000400540 IRF3Q14653 427 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 CDK10Q15131 360 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 TMEM61Q8N0U2 210 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 VKORC1L1Q8N0U8 176 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 TTC9CQ8N5M4 171 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 NECAP1Q8NC96 275 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 OSR1Q8TAX0 266 aaPredicted RBP8.93□□□□□ -0.98
LINC00544-201ENST00000400540 KCTD12Q96CX2 325 aaKnown RBP8.93□□□□□ -0.98
LINC00544-201ENST00000400540 RAB3CQ96E17 227 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 CCDC140Q96MF4 163 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 GINS4Q9BRT9 223 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 MLXQ9UH92 298 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 ELF5Q9UKW6 265 aaPredicted RBP8.93□□□□□ -0.98
LINC00544-201ENST00000400540 PCLOQ9Y6V0 5065 aa8.93□□□□□ -0.98
LINC00544-201ENST00000400540 A0A1B0GW64 132 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 TMEM213A2RRL7 107 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 FCGR3BO75015 233 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 GGCTO75223 188 aaKnown RBP8.92□□□□□ -0.98
LINC00544-201ENST00000400540 CBLN1P23435 193 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 FABP5Q01469 135 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 OGFRL1Q5TC84 451 aaPredicted RBP8.92□□□□□ -0.98
LINC00544-201ENST00000400540 H1FOOQ8IZA3 346 aaPredicted RBP8.92□□□□□ -0.98
LINC00544-201ENST00000400540 ADTRPQ96IZ2 230 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 SPIN2AQ99865 258 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 SPIN2BQ9BPZ2 258 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 DCUN1D5Q9BTE7 237 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 TECRQ9NZ01 308 aaKnown RBP8.92□□□□□ -0.98
LINC00544-201ENST00000400540 V9GY05 133 aa8.92□□□□□ -0.98
LINC00544-201ENST00000400540 CXorf65A6NEN9 183 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 LGALS9O00182 355 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 ARL6IP5O75915 188 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 ACTL6BO94805 426 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 SCAF4O95104 1147 aaKnown RBP8.91□□□□□ -0.98
LINC00544-201ENST00000400540 NDUFB8O95169 186 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 DIRAS3O95661 229 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 ARL3P36405 182 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 OR10A3P58181 314 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 RPL30P62888 115 aaKnown RBP8.91□□□□□ -0.98
LINC00544-201ENST00000400540 TPBGQ13641 420 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 CLEC19AQ6UXS0 136 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 SLC16A13Q7RTY0 426 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 MMD2Q8IY49 270 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 OR52B4Q8NGK2 314 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 OR10R2Q8NGX6 335 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 FANCD2OSQ96PS1 177 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 ST6GALNAC5Q9BVH7 336 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 GGTLC1Q9BX51 225 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 FBXL7Q9UJT9 491 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 RAB22AQ9UL26 194 aa8.91□□□□□ -0.98
LINC00544-201ENST00000400540 A0A0J9YWU9 116 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 RAB27BO00194 218 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 IGLV2-14P01704 120 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 IL6RP08887 468 aaPredicted RBP8.9□□□□□ -0.98
LINC00544-201ENST00000400540 MYOD1P15172 320 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 AREGP15514 252 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 HIST1H1DP16402 221 aaKnown RBP8.9□□□□□ -0.98
LINC00544-201ENST00000400540 ZNF57Q68EA5 555 aaPredicted RBP8.9□□□□□ -0.98
LINC00544-201ENST00000400540 BTNL8Q6UX41 500 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 KCTD9Q7L273 389 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 GPHB5Q86YW7 130 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 ZNF645Q8N7E2 425 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 FYTTD1Q96QD9 318 aaKnown RBP8.9□□□□□ -0.98
LINC00544-201ENST00000400540 ZNF257Q9Y2Q1 563 aa8.9□□□□□ -0.98
LINC00544-201ENST00000400540 DNAH2Q9P225 4427 aa8.89□□□□□ -0.99
LINC00544-201ENST00000400540 LOC102724200A0A096LPH7 203 aaPredicted RBP8.89□□□□□ -0.99
LINC00544-201ENST00000400540 IGKV1D-13A0A0B4J2D9 117 aa8.89□□□□□ -0.99
LINC00544-201ENST00000400540 ZNF320A2RRD8 509 aa8.89□□□□□ -0.99
LINC00544-201ENST00000400540 NPIPB5A8MRT5 1133 aa8.89□□□□□ -0.99
LINC00544-201ENST00000400540 A8MWP6 167 aa8.89□□□□□ -0.99
LINC00544-201ENST00000400540 CASQ2O14958 399 aaPredicted RBP8.89□□□□□ -0.99
LINC00544-201ENST00000400540 CREBL2O60519 120 aaPredicted RBP8.89□□□□□ -0.99
LINC00544-201ENST00000400540 KBTBD11O94819 623 aa8.89□□□□□ -0.99
LINC00544-201ENST00000400540 REG1AP05451 166 aa8.89□□□□□ -0.99
LINC00544-201ENST00000400540 IGKV1-13P0DP09 117 aa8.89□□□□□ -0.99
LINC00544-201ENST00000400540 NFYAP23511 347 aaPredicted RBP8.89□□□□□ -0.99
LINC00544-201ENST00000400540 GADD45AP24522 165 aa8.89□□□□□ -0.99
LINC00544-201ENST00000400540 RPL27AP46776 148 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms