RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 AKIRIN1Q9H9L7 192 aaPredicted RBP7.92□□□□□ -1.14
COL28A1-201ENST00000399429 PLSCR2Q9NRY7 297 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 DEPPQ9NTK1 212 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 DUSP13Q9UII6 198 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 RALGAPA1Q6GYQ0 2036 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 IGHV2OR16-5A0A0B4J2B6 119 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 CA1P00915 261 aaPredicted RBP7.92□□□□□ -1.14
COL28A1-201ENST00000399429 FAM87AP0C7U9 286 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 CSN1S1P47710 185 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 GFRA1P56159 465 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 RTL8BQ17RB0 113 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 NMSQ5H8A3 153 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 TEPPQ6URK8 271 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 PNKDQ8N490 385 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 LSM10Q969L4 123 aaKnown RBP7.92□□□□□ -1.14
COL28A1-201ENST00000399429 SPSB4Q96A44 273 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 C1orf147Q96MC9 270 aaPredicted RBP7.92□□□□□ -1.14
COL28A1-201ENST00000399429 AGMATQ9BSE5 352 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 TIMM9Q9Y5J7 89 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 SPCS1Q9Y6A9 102 aa7.92□□□□□ -1.14
COL28A1-201ENST00000399429 LRRK1Q38SD2 2015 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 SYNGR1O43759 233 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 COL9A1P20849 921 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 NPY1RP25929 384 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 RPP25Q9BUL9 199 aaKnown RBP7.91□□□□□ -1.14
COL28A1-201ENST00000399429 THSD7AQ9UPZ6 1657 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 ABCA1O95477 2261 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 A0A0G2JRQ6 117 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 GALR2O43603 387 aaPredicted RBP7.91□□□□□ -1.14
COL28A1-201ENST00000399429 IFI6P09912 130 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 FGF12P61328 243 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 RPL8P62917 257 aaKnown RBP7.91□□□□□ -1.14
COL28A1-201ENST00000399429 FNDC7Q5VTL7 733 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 LYSMD4Q5XG99 296 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 SAXO1Q8IYX7 474 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 TMEM186Q96B77 213 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 TMEM140Q9NV12 185 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 PLCE1Q9P212 2302 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 A0A087X0K7 114 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 TMEM30CPA0ZSE6 113 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 F2Z2F3 143 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 RRHO14718 337 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 CGAP01215 116 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 GCHFRP30047 84 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 ARF6P62330 175 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 OR4S2Q8NH73 311 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 ZNF524Q96C55 264 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 CLEC7AQ9BXN2 247 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 CLEC1BQ9P126 229 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 DNAH12Q6ZR08 3092 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 SCN10AQ9Y5Y9 1956 aa7.91□□□□□ -1.14
COL28A1-201ENST00000399429 hDV102S1A0JD36 115 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 LMO1P25800 156 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 GPR183P32249 361 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 BMI1P35226 326 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 PSG4Q00888 419 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 RHBDD2Q6NTF9 364 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 RPS19BP1Q86WX3 136 aaKnown RBP7.9□□□□□ -1.14
COL28A1-201ENST00000399429 ABHD12Q8N2K0 398 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 BADQ92934 168 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 SCRT1Q9BWW7 348 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 NPVFQ9HCQ7 196 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 SSUH2Q9Y2M2 353 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 LOC389332A0A1B0GUA5 103 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 WISP1O95388 367 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 SMIM21Q3B7S5 101 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 ADTRPQ96IZ2 230 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 IL23AQ9NPF7 189 aa7.9□□□□□ -1.14
COL28A1-201ENST00000399429 LRRC30A6NM36 301 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 CORTO00230 105 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 FAM27BQ5VT28 67 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 SLC23A3Q6PIS1 610 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 DRAM1Q8N682 238 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 TPRX1Q8N7U7 411 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 OR1N2Q8NGR9 330 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 TMEM45BQ96B21 275 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 MCRIP2Q9BUT9 160 aaKnown RBP7.9□□□□□ -1.15
COL28A1-201ENST00000399429 OR2H1Q9GZK4 316 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 B4GALT7Q9UBV7 327 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 ZNF407Q9C0G0 2248 aa7.9□□□□□ -1.15
COL28A1-201ENST00000399429 IGKV1-12A0A0C4DH73 117 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 FAM90A26D6RGX4 464 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 CDIPTO14735 213 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 GOSR1O95249 250 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 IGKV1D-12P01611 117 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 P01737 135 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 LHX2P50458 406 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 Q6ZRM9 215 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 OR2K2Q8NGT1 345 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 OR10AG1Q8NH19 301 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 SIGMAR1Q99720 223 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 MRPS16Q9Y3D3 137 aaKnown RBP7.89□□□□□ -1.15
COL28A1-201ENST00000399429 TNS1Q9HBL0 1735 aaKnown RBP7.89□□□□□ -1.15
COL28A1-201ENST00000399429 HBZP02008 142 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 TYMSP04818 313 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 RBX1P62877 108 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 IGLV3-21P80748 117 aaPredicted RBP7.89□□□□□ -1.15
COL28A1-201ENST00000399429 YPEL4Q96NS1 127 aa7.89□□□□□ -1.15
COL28A1-201ENST00000399429 TCF20Q9UGU0 1960 aaKnown RBP7.89□□□□□ -1.15
COL28A1-201ENST00000399429 SPTBN2O15020 2390 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms