RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CHST1O43916 411 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 SFT2D2O95562 160 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 MECP2P51608 486 aaKnown RBP18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 UBA52P62987 128 aaKnown RBP18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 TMEM187Q14656 261 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 CASTOR1Q8WTX7 329 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 GLYATL2Q8WU03 294 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 MARVELD1Q9BSK0 173 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 RAB18Q9NP72 206 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 PLSCR3Q9NRY6 295 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 PRR13Q9NZ81 148 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 COMMD9Q9P000 198 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 KIAA1456Q9P272 454 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 C9orf170A2RU37 121 aa18.82■□□□□ 0.6
TSPAN4-203ENST00000397397 GPR137BO60478 399 aa18.82■□□□□ 0.6
TSPAN4-203ENST00000397397 HRASP01112 189 aa18.82■□□□□ 0.6
TSPAN4-203ENST00000397397 HLA-AP01891 365 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-203ENST00000397397 RPA2P15927 270 aa18.82■□□□□ 0.6
TSPAN4-203ENST00000397397 PSG5Q15238 335 aa18.82■□□□□ 0.6
TSPAN4-203ENST00000397397 LYG2Q86SG7 212 aa18.82■□□□□ 0.6
TSPAN4-203ENST00000397397 NPBQ8NG41 125 aa18.82■□□□□ 0.6
TSPAN4-203ENST00000397397 R3HDM4Q96D70 268 aa18.82■□□□□ 0.6
TSPAN4-203ENST00000397397 IGKV1-39P01597 117 aa18.81■□□□□ 0.6
TSPAN4-203ENST00000397397 IGLV2-23P01705 113 aa18.81■□□□□ 0.6
TSPAN4-203ENST00000397397 IGKV1D-39P04432 117 aa18.81■□□□□ 0.6
TSPAN4-203ENST00000397397 RNASE1P07998 156 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-203ENST00000397397 NQO2P16083 231 aa18.81■□□□□ 0.6
TSPAN4-203ENST00000397397 DHRS2Q13268 280 aa18.81■□□□□ 0.6
TSPAN4-203ENST00000397397 VKORC1L1Q8N0U8 176 aa18.81■□□□□ 0.6
TSPAN4-203ENST00000397397 AIFM2Q9BRQ8 373 aa18.81■□□□□ 0.6
TSPAN4-203ENST00000397397 RRHO14718 337 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 SLC25A17O43808 307 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 NDUFA3O95167 84 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 SPDEFO95238 335 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 RAG2P55895 527 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 ERVK-16P61578 105 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 VMA21Q3ZAQ7 101 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 SSX9Q7RTT3 188 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 ZNF695Q8IW36 515 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 OR52B4Q8NGK2 314 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 SEC22CQ9BRL7 303 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 FBXL15Q9H469 300 aa18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 METTL1Q9UBP6 276 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-203ENST00000397397 CDS2O95674 445 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 DHFRP00374 187 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 KRASP01116 189 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 G6PCP35575 357 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 UBE2KP61086 200 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 PLGLAQ15195 96 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 TMEM268Q5VZI3 342 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 Q8N9W7 124 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 DMBX1Q8NFW5 382 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 LHFPL5Q8TAF8 219 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 RHOVQ96L33 236 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 JMJD1CQ15652 2540 aa18.79■□□□□ 0.6
TSPAN4-203ENST00000397397 TRIM77I1YAP6 450 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 M0QZK8 103 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 FGF16O43320 207 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 IL5P05113 134 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 SAA1P0DJI8 122 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 SRPXP78539 464 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 OXA1LQ15070 435 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 C5orf64Q2M2E5 130 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 ANKRD55Q3KP44 614 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 SELENOHQ8IZQ5 122 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 LGI3Q8N145 548 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 C5orf56Q8N8D9 126 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 TMEM56Q96MV1 263 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 RASL11BQ9BPW5 248 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 TMEM56-RWDD3S4R434 201 aa18.78■□□□□ 0.6
TSPAN4-203ENST00000397397 FAM181BA6NEQ2 426 aa18.77■□□□□ 0.6
TSPAN4-203ENST00000397397 MARCH11A6NNE9 402 aa18.77■□□□□ 0.6
TSPAN4-203ENST00000397397 ATG12O94817 140 aa18.77■□□□□ 0.6
TSPAN4-203ENST00000397397 SRSF2Q01130 221 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-203ENST00000397397 POU2AF1Q16633 256 aa18.77■□□□□ 0.6
TSPAN4-203ENST00000397397 FAM71E2Q8N5Q1 922 aa18.77■□□□□ 0.6
TSPAN4-203ENST00000397397 TEX45Q8NA69 505 aa18.77■□□□□ 0.6
TSPAN4-203ENST00000397397 RBPMSQ93062 196 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-203ENST00000397397 PRAF2O60831 178 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 OR2A4O95047 310 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 DUS4LO95620 317 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 CRYGBP07316 175 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 AKR1C2P52895 323 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 OR4A47Q6IF82 309 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 VSTM2AQ8TAG5 236 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 ZNF431Q8TF32 576 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 IL22RA2Q969J5 263 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 SEC22AQ96IW7 307 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 OR2A7Q96R45 310 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 TPSG1Q9NRR2 321 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 TMEM140Q9NV12 185 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 SIGLEC9Q9Y336 463 aa18.76■□□□□ 0.59
TSPAN4-203ENST00000397397 SH2D7A6NKC9 451 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 AMY1AP04745 511 aa18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 LIN54Q6MZP7 749 aa18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 PUSL1Q8N0Z8 303 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 MINDY2Q8NBR6 621 aa18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 COQ8AQ8NI60 647 aa18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 RNASE11Q8TAA1 199 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-203ENST00000397397 CHPT1Q8WUD6 406 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms