RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 AKIP1Q9NQ31 210 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 SDHAF2Q9NX18 166 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 ALMS1Q8TCU4 4167 aa6.6□□□□□ -1.35
CAPN3-208ENST00000397204 TRBV6-7A0A0A0MS04 114 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.59□□□□□ -1.35
CAPN3-208ENST00000397204 BMPR1BO00238 502 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 SLC17A2O00624 439 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 ACTL6BO94805 426 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 CD7P09564 240 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 FOLR2P14207 255 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 LINC00310P59036 64 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 MRPS15P82914 257 aaKnown RBP6.59□□□□□ -1.35
CAPN3-208ENST00000397204 SPHARQ15513 63 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 GUCA2BQ16661 112 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 LAIR2Q6ISS4 152 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 C8orf59Q8N0T1 100 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-208ENST00000397204 TTC9CQ8N5M4 171 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 NECAP1Q8NC96 275 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 BPIFB6Q8NFQ5 453 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 OR56B1Q8NGI3 324 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 OR10J5Q8NHC4 309 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 ARHGAP5-AS1Q96IT6 56 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 ADTRPQ96IZ2 230 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 MND1Q9BWT6 205 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 PECRQ9BY49 303 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 KCNK15Q9H427 330 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 SRD5A3Q9H8P0 318 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 PLGRKTQ9HBL7 147 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 ZC4H2Q9NQZ6 224 aa6.59□□□□□ -1.35
CAPN3-208ENST00000397204 LGALS9O00182 355 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 BET1O15155 118 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 MPPED1O15442 326 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 FABP7O15540 132 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 CREBL2O60519 120 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-208ENST00000397204 GGCTO75223 188 aaKnown RBP6.58□□□□□ -1.36
CAPN3-208ENST00000397204 CD3GP09693 182 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 APELAP0DMC3 54 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 MAP2K4P45985 399 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 PSMD7P51665 324 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 EXOSC2Q13868 293 aaKnown RBP6.58□□□□□ -1.36
CAPN3-208ENST00000397204 P2RY14Q15391 338 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 TNXAQ16473 311 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 C2orf76Q3KRA6 126 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 AHSA2Q719I0 299 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 SLC16A13Q7RTY0 426 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 SLC25A42Q86VD7 318 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 GPHB5Q86YW7 130 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 OSR1Q8TAX0 266 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-208ENST00000397204 DYNLRB2Q8TF09 96 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 SRSF12Q8WXF0 261 aaKnown RBP6.58□□□□□ -1.36
CAPN3-208ENST00000397204 OR2D2Q9H210 308 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 FKBP14Q9NWM8 211 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 ZNF230Q9UIE0 474 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-208ENST00000397204 FRAS1Q86XX4 4008 aa6.58□□□□□ -1.36
CAPN3-208ENST00000397204 HERC2O95714 4834 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 DNAH10Q8IVF4 4471 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 C2orf70A6NJV1 201 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 DENRO43583 198 aaKnown RBP6.57□□□□□ -1.36
CAPN3-208ENST00000397204 ARL6IP5O75915 188 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 OR2C1O95371 312 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 PRH1P02810 166 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 CDK1P06493 297 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 GNAO1P09471 354 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 GSTT2P0CG29 244 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 GSTT2BP0CG30 244 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 CBLN1P23435 193 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 DUTP33316 252 aaKnown RBP6.57□□□□□ -1.36
CAPN3-208ENST00000397204 DEFA5Q01523 94 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 ZNF45Q02386 682 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 RAB11BQ15907 218 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 ANKRD55Q3KP44 614 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 FAM106AQ4KMX7 169 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 IGSF11Q5DX21 431 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 PLAC9Q5JTB6 97 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 IQCF2Q8IXL9 164 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 MMD2Q8IY49 270 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 ACOT12Q8WYK0 555 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 LINC00476Q8WZB0 136 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 DDB2Q92466 427 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 FAM3DQ96BQ1 224 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 OVOL2Q9BRP0 275 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 CABLES2Q9BTV7 478 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 ZNF430Q9H8G1 570 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-208ENST00000397204 RAB22AQ9UL26 194 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 KCNK7Q9Y2U2 307 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 RBM7Q9Y580 266 aaKnown RBP6.57□□□□□ -1.36
CAPN3-208ENST00000397204 DMRT1Q9Y5R6 373 aa6.57□□□□□ -1.36
CAPN3-208ENST00000397204 KRTAP4-8A0A0G2JLE6 195 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 PTGES3LE9PB15 166 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 CRYZL1O95825 349 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 FCGR3AP08637 254 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 CDK10Q15131 360 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 TRAM1Q15629 374 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 SSX1Q16384 188 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 C15orf32Q32M92 178 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 TMEM91Q6ZNR0 172 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 Q6ZS49 121 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 TMEM203Q969S6 136 aa6.56□□□□□ -1.36
CAPN3-208ENST00000397204 RAB3CQ96E17 227 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms