RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 EPHA8P29322 1005 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-206ENST00000397163 NRN1LQ496H8 165 aa7.7□□□□□ -1.18
CAPN3-206ENST00000397163 NUDT10Q8NFP7 164 aa7.7□□□□□ -1.18
CAPN3-206ENST00000397163 WIPI2Q9Y4P8 454 aa7.7□□□□□ -1.18
CAPN3-206ENST00000397163 U3KQA8 63 aa7.7□□□□□ -1.18
CAPN3-206ENST00000397163 TRAV38-1A0A0B4J264 116 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 IGHV3-64DA0A0J9YX35 117 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 PRSS47A8MTI9 375 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 PDE6DO43924 150 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 OR2H2O95918 312 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 CRISP2P16562 243 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 RIPPLY3P57055 190 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 RANP62826 216 aaKnown RBP7.69□□□□□ -1.18
CAPN3-206ENST00000397163 KIAA1644Q3SXP7 199 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 Q6P435 159 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 OR2Y1Q8NGV0 311 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 MPC1Q9Y5U8 109 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 FRYLO94915 3013 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 A0A1W2PPV4 95 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 F6UZH7 168 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 CCL4P13236 92 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 CD99P14209 185 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 RAC2P15153 192 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 KITLGP21583 273 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 OTX2P32243 289 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 FOLR3P41439 243 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 TGFBR3Q03167 851 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 IL11RAQ14626 422 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 GCSAMLQ5JQS6 135 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 SPATA46Q5T0L3 261 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 TMEM144Q7Z5S9 345 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 TUSC5Q8IXB3 177 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 TMEM45BQ96B21 275 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 OR2D2Q9H210 308 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 ELOVL5Q9NYP7 299 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 COX11Q9Y6N1 276 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 FREM2Q5SZK8 3169 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 PMS2P5A8MQ11 134 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 J3QT63 122 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 S1PR2O95136 353 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 EDDM3BP56851 147 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 RPL30P62888 115 aaKnown RBP7.69□□□□□ -1.18
CAPN3-206ENST00000397163 FOXL1Q12952 345 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 ZNF497Q6ZNH5 498 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 S100A7AQ86SG5 101 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 ORAOV1Q8WV07 137 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 ST6GALNAC6Q969X2 333 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 SFRP2Q96HF1 295 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 POM121L2Q96KW2 1035 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 DEPPQ9NTK1 212 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 SIT1Q9Y3P8 196 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 FREM1Q5H8C1 2179 aa7.69□□□□□ -1.18
CAPN3-206ENST00000397163 BDP1A6H8Y1 2624 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 SLC17A3O00476 420 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 UBE2NP61088 152 aaKnown RBP7.68□□□□□ -1.18
CAPN3-206ENST00000397163 SLC35B1P78383 322 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 H2BFWTQ7Z2G1 175 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 SMIM15Q7Z3B0 74 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 ZNF738Q8NE65 137 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 PKIBQ9C010 78 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 KCNIP1Q9NZI2 227 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 TBL2Q9Y4P3 447 aaKnown RBP7.68□□□□□ -1.18
CAPN3-206ENST00000397163 PINLYPA6NC86 204 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 TMPRSS2O15393 492 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 RBFOX2O43251 390 aaKnown RBP eCLIP7.68□□□□□ -1.181e-6■■■■■ 32.4
CAPN3-206ENST00000397163 PSG1P11464 419 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 COL8A2P25067 703 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 CATR1Q13166 79 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 LCN12Q6JVE5 192 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 MRPL52Q86TS9 123 aaKnown RBP7.68□□□□□ -1.18
CAPN3-206ENST00000397163 WFDC8Q8IUA0 241 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 FAM19A2Q8N3H0 131 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 SIGLECL1Q8N7X8 197 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 MRPL18Q9H0U6 180 aaKnown RBP7.68□□□□□ -1.18
CAPN3-206ENST00000397163 ZDBF2Q9HCK1 2354 aa7.68□□□□□ -1.18
CAPN3-206ENST00000397163 K7EP13 123 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 GOSR1O95249 250 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 IGLC2P0DOY2 106 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 IGLC3P0DOY3 106 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 ARR3P36575 388 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 AMTP48728 403 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 ZNF90Q03938 601 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 C1orf185Q5T7R7 199 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 ZNF645Q8N7E2 425 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 ZNF596Q8TC21 504 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 LINC00470Q9BZP3 86 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 KCNIP2Q9NS61 270 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 UQCR10Q9UDW1 63 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 C17orf98A8MV24 154 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 NTF3P20783 257 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 IER3P46695 156 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 LHX2P50458 406 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 FAM53AQ6NSI3 398 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-206ENST00000397163 OR10G8Q8NGN5 311 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 IFI44Q8TCB0 444 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 RCHY1Q96PM5 261 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 TECTAO75443 2155 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 TMEM238C9JI98 176 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 M0R296 226 aa7.67□□□□□ -1.18
CAPN3-206ENST00000397163 SS18L1O75177 396 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms