RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 YPEL1O60688 119 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 MPDU1O75352 247 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 C1QTNF9P0C862 333 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 DEFA4P12838 97 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 GABRA6Q16445 453 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 SPATA46Q5T0L3 261 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 H2BFWTQ7Z2G1 175 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 TMEM256Q8N2U0 113 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 ZNF114Q8NC26 417 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 OR52L2PQ8NGH6 319 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 YPEL2Q96QA6 119 aa11.1□□□□□ -0.63
TRIM40-207ENST00000396581 ESPL1Q14674 2120 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 TRAV9-1A0A075B6T8 112 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 FAM90A9PA6NNJ1 464 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 NUPR1O60356 82 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 SMPD2O60906 423 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 NDUFB4O95168 129 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 HBZP02008 142 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 CD1BP29016 333 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 GCH1P30793 250 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 MEOX1P50221 254 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 TMPRSS3P57727 454 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 ARG2P78540 354 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 IGFL2Q6UWQ7 119 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 BTNL3Q6UXE8 466 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 DERL1Q9BUN8 251 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 OR51B6Q9H340 312 aa11.09□□□□□ -0.63
TRIM40-207ENST00000396581 FAM166BA8MTA8 275 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 IQCF6A8MYZ5 107 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 STAG3L2P0CL84 134 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 STAG3L3P0CL85 134 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 OPRK1P41145 380 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 TNFSF10P50591 281 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 TDGF1P3P51864 188 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 TBC1D28Q2M2D7 210 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 PDLIM3Q53GG5 364 aaPredicted RBP11.08□□□□□ -0.63
TRIM40-207ENST00000396581 FBXW9Q5XUX1 488 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 ZNF808Q8N4W9 903 aaPredicted RBP11.08□□□□□ -0.63
TRIM40-207ENST00000396581 FDCSPQ8NFU4 85 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 SGMS2Q8NHU3 365 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 PRR7Q8TB68 274 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 R3HDM4Q96D70 268 aa11.08□□□□□ -0.63
TRIM40-207ENST00000396581 HSD17B10Q99714 261 aaKnown RBP11.08□□□□□ -0.63
TRIM40-207ENST00000396581 CFAP47Q6ZTR5 3102 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 LINC00473A8K010 186 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 PRSS46E5RG02 174 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 CRYAAP02489 173 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 EGR1P18146 543 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 CCL11P51671 97 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 PLGLB1Q02325 96 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 FAM53AQ6NSI3 398 aaPredicted RBP11.08□□□□□ -0.64
TRIM40-207ENST00000396581 FIP1L1Q6UN15 594 aaKnown RBP11.08□□□□□ -0.64
TRIM40-207ENST00000396581 TMEM178AQ8NBL3 297 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 ZCCHC14Q8WYQ9 949 aaKnown RBP11.08□□□□□ -0.64
TRIM40-207ENST00000396581 COQ2Q96H96 371 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 MS4A10Q96PG2 267 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 CBLN4Q9NTU7 201 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 TP53TG3Q9ULZ0 132 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 MED12LQ86YW9 2145 aa11.08□□□□□ -0.64
TRIM40-207ENST00000396581 TRAV38-1A0A0B4J264 116 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 MARCH11A6NNE9 402 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 IFNL4K9M1U5 179 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 SCGB1D1O95968 90 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 BTF3P20290 206 aaKnown RBP11.07□□□□□ -0.64
TRIM40-207ENST00000396581 ADMP35318 185 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 TIMP3P35625 211 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 PAFAH1B2P68402 229 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 GCSAMLQ5JQS6 135 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 OR5T1Q8NG75 326 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 GMPPAQ96IJ6 420 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-207ENST00000396581 OR2J1Q9GZK6 312 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 MDFIC2A0A1B0GVS7 189 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 A0A1B0GWJ7 208 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 M0QZK8 103 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 CEBPDP49716 269 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-207ENST00000396581 LINC00310P59036 64 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 RPS16P62249 146 aaKnown RBP11.07□□□□□ -0.64
TRIM40-207ENST00000396581 CST9LP1Q5W188 147 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 TEX43Q6ZNM6 134 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 MCEMP1Q8IX19 187 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 C11orf53Q8IXP5 236 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 OR52E5Q8NH55 327 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 NINJ1Q92982 152 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 TMEM68Q96MH6 324 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 WFIKKN1Q96NZ8 548 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 C20orf144Q9BQM9 153 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 QTRT1Q9BXR0 403 aaKnown RBP11.07□□□□□ -0.64
TRIM40-207ENST00000396581 TMEM106BQ9NUM4 274 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
TRIM40-207ENST00000396581 DCHS1Q96JQ0 3298 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 ARHGAP21Q5T5U3 1957 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 A0A1B0GUS0 222 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 A0A1W2PPV4 95 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 CEACAM4O75871 244 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 UBE2G2P60604 165 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 ATG101Q9BSB4 218 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 ZDHHC11Q9H8X9 412 aa11.06□□□□□ -0.64
TRIM40-207ENST00000396581 AURKAIP1Q9NWT8 199 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms