RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 KCNK7Q9Y2U2 307 aa12.52□□□□□ -0.41
DDR1-229ENST00000396342 OR2W1Q9Y3N9 320 aa12.52□□□□□ -0.41
DDR1-229ENST00000396342 SORL1Q92673 2214 aa12.52□□□□□ -0.41
DDR1-229ENST00000396342 COL7A1Q02388 2944 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 SHISA3A0PJX4 238 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 RAB27BO00194 218 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 CYB5BO43169 146 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 MRPS14O60783 128 aaKnown RBP12.51□□□□□ -0.41
DDR1-229ENST00000396342 HRASP01112 189 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 OR10A3P58181 314 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 ARPC4P59998 168 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 ZFAND6Q6FIF0 208 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 C22orf42Q6IC83 251 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 IDO2Q6ZQW0 420 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 LAX1Q8IWV1 398 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 TCTEX1D2Q8WW35 142 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 C19orf73Q9NVV2 129 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 SSR3Q9UNL2 185 aa12.51□□□□□ -0.41
DDR1-229ENST00000396342 SRRM4A7MD48 611 aaKnown RBP12.5□□□□□ -0.41
DDR1-229ENST00000396342 NOTOA8MTQ0 251 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 DEFA4P12838 97 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 PSMB9P28065 219 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 MAS1LP35410 378 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 KIR2DS2P43631 304 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 DYRK1AQ13627 763 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 GUCA2BQ16661 112 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 HACD4Q5VWC8 232 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 TPRA1Q86W33 373 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 Q8N1Y9 231 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 FCGR1BQ92637 280 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 OR51E2Q9H255 320 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 ZNF430Q9H8G1 570 aaPredicted RBP12.5□□□□□ -0.41
DDR1-229ENST00000396342 AKIP1Q9NQ31 210 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 ZNF257Q9Y2Q1 563 aa12.5□□□□□ -0.41
DDR1-229ENST00000396342 GGCTO75223 188 aaKnown RBP12.49□□□□□ -0.41
DDR1-229ENST00000396342 SAA1P0DJI8 122 aaPredicted RBP12.49□□□□□ -0.41
DDR1-229ENST00000396342 CD81P60033 236 aa12.49□□□□□ -0.41
DDR1-229ENST00000396342 FAM106AQ4KMX7 169 aa12.49□□□□□ -0.41
DDR1-229ENST00000396342 SLC16A13Q7RTY0 426 aa12.49□□□□□ -0.41
DDR1-229ENST00000396342 TTC9CQ8N5M4 171 aa12.49□□□□□ -0.41
DDR1-229ENST00000396342 FYTTD1Q96QD9 318 aaKnown RBP12.49□□□□□ -0.41
DDR1-229ENST00000396342 OR2A7Q96R45 310 aa12.49□□□□□ -0.41
DDR1-229ENST00000396342 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
DDR1-229ENST00000396342 RBMX2Q9Y388 322 aaKnown RBP12.49□□□□□ -0.41
DDR1-229ENST00000396342 JTBO76095 146 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 CSN3P07498 182 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 HIST1H1BP16401 226 aaKnown RBP12.48□□□□□ -0.41
DDR1-229ENST00000396342 NFYAP23511 347 aaPredicted RBP12.48□□□□□ -0.41
DDR1-229ENST00000396342 RPL27AP46776 148 aaKnown RBP12.48□□□□□ -0.41
DDR1-229ENST00000396342 GABARAPL2P60520 117 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 DEFA5Q01523 94 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 PLA2G7Q13093 441 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 HAGHQ16775 308 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 C15orf32Q32M92 178 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 OR2B11Q5JQS5 317 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 NRG4Q8WWG1 115 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 DDB2Q92466 427 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 DAPK2Q9UIK4 370 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 RAB26Q9ULW5 256 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 SPATA2Q9UM82 520 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 CEPT1Q9Y6K0 416 aa12.48□□□□□ -0.41
DDR1-229ENST00000396342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.47□□□□□ -0.41
DDR1-229ENST00000396342 LINC00473A8K010 186 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 OR2J3O76001 311 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 HLA-DQB1P01920 261 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 ANKRD55Q3KP44 614 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 ZNF66Q6ZN08 573 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 BORCS5Q969J3 196 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 EEF1AKMT3Q96AZ1 226 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 NEURL2Q9BR09 285 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 THYN1Q9P016 225 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 FBXL7Q9UJT9 491 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 RRP15Q9Y3B9 282 aaKnown RBP12.47□□□□□ -0.41
DDR1-229ENST00000396342 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
DDR1-229ENST00000396342 ZNF320A2RRD8 509 aa12.46□□□□□ -0.41
DDR1-229ENST00000396342 TRBV12-3P01733 135 aa12.46□□□□□ -0.41
DDR1-229ENST00000396342 PRH1P02810 166 aa12.46□□□□□ -0.41
DDR1-229ENST00000396342 SSBP2P81877 361 aaPredicted RBP12.46□□□□□ -0.41
DDR1-229ENST00000396342 CATR1Q13166 79 aa12.46□□□□□ -0.41
DDR1-229ENST00000396342 OR4A47Q6IF82 309 aa12.46□□□□□ -0.41
DDR1-229ENST00000396342 HRASLSQ9HDD0 168 aa12.46□□□□□ -0.41
DDR1-229ENST00000396342 ANXA10Q9UJ72 324 aa12.46□□□□□ -0.41
DDR1-229ENST00000396342 TRBV9A0A0B4J1U6 114 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 LCE6AA0A183 80 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 KBTBD11O94819 623 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 SNRPBP14678 240 aaKnown RBP12.45□□□□□ -0.42
DDR1-229ENST00000396342 FGF9P31371 208 aaPredicted RBP12.45□□□□□ -0.42
DDR1-229ENST00000396342 ARL3P36405 182 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 RPL8P62917 257 aaKnown RBP12.45□□□□□ -0.42
DDR1-229ENST00000396342 IL34Q6ZMJ4 242 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 ZBTB34Q8NCN2 500 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 OR4A5Q8NH83 315 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 NUDCD2Q8WVJ2 157 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 CXorf58Q96LI9 332 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 PLEKHA3Q9HB20 300 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 DIABLOQ9NR28 239 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 SLC2A9Q9NRM0 540 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 TAS2R8Q9NYW2 309 aa12.45□□□□□ -0.42
DDR1-229ENST00000396342 SMIM30A4D0T7 59 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms