RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 A0A1W2PR64 198 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 A0A1W2PRV1 198 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 SFTA3P0C7M3 94 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 SAA2P0DJI9 122 aaPredicted RBP10.01□□□□□ -0.81
ITGB1-202ENST00000396033 CDSNQ15517 529 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 S1PR3Q99500 378 aa10.01□□□□□ -0.81
ITGB1-202ENST00000396033 MMP23AO75900 390 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 CD5P06127 495 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 FOSL1P15407 271 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 RPL31P62899 125 aaKnown RBP10□□□□□ -0.81
ITGB1-202ENST00000396033 HBG1P69891 147 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 HBG2P69892 147 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 SSX9Q7RTT3 188 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 LYG1Q8N1E2 194 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 LYPD6BQ8NI32 183 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 YPEL4Q96NS1 127 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 GGACTQ9BVM4 153 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 PRDM13Q9H4Q3 707 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 NBASA2RRP1 2371 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 NQO2P16083 231 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 KIR2DS2P43631 304 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 ARL16Q0P5N6 197 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 TMEM30BQ3MIR4 351 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 GAL3ST2Q9H3Q3 398 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 LINC00574Q9H8X3 128 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 METTL1Q9UBP6 276 aaKnown RBP10□□□□□ -0.81
ITGB1-202ENST00000396033 ANKHD1Q8IWZ3 2542 aaKnown RBP10□□□□□ -0.81
ITGB1-202ENST00000396033 SIAH2O43255 324 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 ERVK-16P61578 105 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 C1orf229Q6ZS94 237 aaPredicted RBP10□□□□□ -0.81
ITGB1-202ENST00000396033 HAPLN4Q86UW8 402 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 ZNF436-AS1Q8NC38 126 aaPredicted RBP10□□□□□ -0.81
ITGB1-202ENST00000396033 ZNF439Q8NDP4 499 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 H1FXQ92522 213 aaKnown RBP10□□□□□ -0.81
ITGB1-202ENST00000396033 C14orf144Q96I85 54 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 PRORYQ9H606 182 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 RPUSD1Q9UJJ7 312 aaKnown RBP10□□□□□ -0.81
ITGB1-202ENST00000396033 GAB2Q9UQC2 676 aa10□□□□□ -0.81
ITGB1-202ENST00000396033 IGHV1-69-2A0A0G2JMI3 117 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 UMAD1C9J7I0 102 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 RBFOX2O43251 390 aaKnown RBP eCLIP9.99□□□□□ -0.81
ITGB1-202ENST00000396033 OR2B8PP59922 312 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 MRPS11P82912 194 aaKnown RBP9.99□□□□□ -0.81
ITGB1-202ENST00000396033 MEF2CQ06413 473 aaPredicted RBP9.99□□□□□ -0.81
ITGB1-202ENST00000396033 SPINK9Q5DT21 86 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 DTD1Q8TEA8 209 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 ZDHHC16Q969W1 377 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 CEBPZOSA8MTT3 80 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 NDUFB3O43676 98 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 GATCO43716 136 aaKnown RBP9.99□□□□□ -0.81
ITGB1-202ENST00000396033 ZG16O60844 167 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 OR9G9P0C7N8 305 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 PAX6P26367 422 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 LRRC10Q5BKY1 277 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 OR8G2PQ6IF36 304 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 LYPD2Q6UXB3 125 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 MUC15Q8N387 334 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 ZNF525Q8N782 197 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 RELNP78509 3460 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 PEA15Q15121 130 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 THNSL2Q86YJ6 484 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 OR4S2Q8NH73 311 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 SCGB1C1Q8TD33 95 aa9.99□□□□□ -0.81
ITGB1-202ENST00000396033 QTRT1Q9BXR0 403 aaKnown RBP9.99□□□□□ -0.81
ITGB1-202ENST00000396033 A0A1B0GV50 99 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 A0A1W2PPH5 198 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 RNASEK-C17orf49H0YIS7 233 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 FCN3O75636 299 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 SFTPCP11686 197 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 AKR1C8PQ5T2L2 129 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 TMEM14EPQ6UXP3 125 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 VKORC1L1Q8N0U8 176 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 DDB2Q92466 427 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 ZNF714Q96N38 554 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 OR4C12Q96R67 309 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 ARFGEF3Q5TH69 2177 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 CCL3L1P16619 93 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 THBS3P49746 956 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 SLC38A11Q08AI6 406 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 ZNF672Q499Z4 452 aaPredicted RBP9.98□□□□□ -0.81
ITGB1-202ENST00000396033 CIB3Q96Q77 187 aaPredicted RBP9.98□□□□□ -0.81
ITGB1-202ENST00000396033 SNCAP37840 140 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 ERVFRD-1P60508 538 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 COMMD1Q8N668 190 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 OR4A16Q8NH70 328 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 CTSZQ9UBR2 303 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 FBXO7Q9Y3I1 522 aa9.98□□□□□ -0.81
ITGB1-202ENST00000396033 YLPM1P49750 1951 aaKnown RBP9.98□□□□□ -0.81
ITGB1-202ENST00000396033 YIF1AO95070 293 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 S100A8P05109 93 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 DVL1P1P54792 670 aaPredicted RBP9.97□□□□□ -0.81
ITGB1-202ENST00000396033 SLC25A48Q6ZT89 311 aaKnown RBP9.97□□□□□ -0.81
ITGB1-202ENST00000396033 PIEZO1Q92508 2521 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 COL6A6A6NMZ7 2263 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 FAM90A9PA6NNJ1 464 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 DVL1O14640 695 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 TNFRSF13BO14836 293 aaPredicted RBP9.97□□□□□ -0.81
ITGB1-202ENST00000396033 IFNA17P01571 189 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 TMEM200BQ69YZ2 307 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 ADTRPQ96IZ2 230 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms