RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 FNDC10F2Z333 226 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 PGLYRP1O75594 196 aaPredicted RBP2.86□□□□□ -1.95
VPS13C-203ENST00000395896 NMBP08949 121 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 SRSF4Q08170 494 aaKnown RBP2.86□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM41BQ5BJD5 291 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 UNQ6494/PRO21346Q6UXR6 183 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 LYZL2Q7Z4W2 148 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 SNRNP40Q96DI7 357 aaKnown RBP2.86□□□□□ -1.95
VPS13C-203ENST00000395896 GRAMD2BQ96HH9 432 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 CBLN4Q9NTU7 201 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 GAB2Q9UQC2 676 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 SSX5O60225 188 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 SDSLQ96GA7 329 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 QTRT1Q9BXR0 403 aaKnown RBP2.86□□□□□ -1.95
VPS13C-203ENST00000395896 COL10A1Q03692 680 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 CD300CQ08708 224 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 LTC4SQ16873 150 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM155Q4W5P6 130 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 ITLN1Q8WWA0 313 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 RASL11BQ9BPW5 248 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 A0A087WV48 116 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 DBX1A6NMT0 343 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 PRR32B1ATL7 298 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 FLI1Q01543 452 aaPredicted RBP2.86□□□□□ -1.95
VPS13C-203ENST00000395896 GUK1Q16774 197 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 SIGIRRQ6IA17 410 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 OR4D10Q8NGI6 311 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 C17orf51A8MQB3 221 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 DANCRP0C864 163 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF816Q0VGE8 651 aaPredicted RBP2.86□□□□□ -1.95
VPS13C-203ENST00000395896 GNG13Q9P2W3 67 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 ARL2-SNX15V9GYD0 113 aa2.86□□□□□ -1.95
VPS13C-203ENST00000395896 PPIAL4CA0A0B4J2A2 164 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 HSPB1P04792 205 aaKnown RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 PPIAL4GP0DN37 164 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 BTNL8Q6UX41 500 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 C1QL2Q7Z5L3 287 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 C12orf77C9JDV5 145 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 GNG7O60262 68 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 HIST1H1BP16401 226 aaKnown RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 ID3Q02535 119 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 FAM27E3Q08E93 113 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 TVP23CQ96ET8 276 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 DLL1O00548 723 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 B2MP61769 119 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 EWSR1Q01844 656 aaKnown RBP eCLIP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 AKIRIN2Q53H80 203 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 MOB3BQ86TA1 216 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 BOLA1Q9Y3E2 137 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 UTP20O75691 2785 aaKnown RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 MMDQ15546 238 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 HSPB7Q9UBY9 170 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 MAP1LC3B2A6NCE7 125 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 VSIG10L2P0DP72 767 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 RPL7P18124 248 aaKnown RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 C1orf122Q6ZSJ8 110 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 MAP1LC3BQ9GZQ8 125 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 RPUSD1Q9UJJ7 312 aaKnown RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 RNASEK-C17orf49H0YIS7 233 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 KBTBD11O94819 623 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 CD55P08174 381 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 PPOXP50336 477 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 TOR2AQ5JU69 321 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 MINOS1Q5TGZ0 78 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 SSX9Q7RTT3 188 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 Q8WTZ3 238 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 MINOS1-NBL1R4GNA1 71 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 TNFSF13O75888 250 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 FGF7P21781 194 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 IDI2-AS1Q9NZ38 188 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 ANAPC10Q9UM13 185 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 PUS1Q9Y606 427 aaKnown RBP eCLIP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 IGHV2-70P01814 119 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 C8orf31Q8N9H6 132 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 OR10G4Q8NGN3 311 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 OR10G9Q8NGN4 311 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 OR10G7Q8NGN6 311 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 OR2T10Q8NGZ9 312 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 IGHV1-18A0A0C4DH31 117 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 PTBP3O95758 552 aaKnown RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 SPNP16150 400 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 BTCP35070 178 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 SLC35B1P78383 322 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 HERPUD1Q15011 391 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 EFNB3Q15768 340 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 ATP1A1-AS1Q5TC04 95 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF660Q6AZW8 331 aaPredicted RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 ZNRF1Q8ND25 227 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 OR4F5Q8NH21 305 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 C1orf147Q96MC9 270 aaPredicted RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 OR4F4Q96R69 305 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 PIMREGQ9BSJ6 248 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 MRPL32Q9BYC8 188 aaKnown RBP2.85□□□□□ -1.95
VPS13C-203ENST00000395896 BET1LQ9NYM9 111 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 VENTXO95231 258 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 RAB4AP20338 218 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM187Q14656 261 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 MORN2Q502X0 79 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 CYB5R2Q6BCY4 276 aa2.85□□□□□ -1.95
VPS13C-203ENST00000395896 WDR73Q6P4I2 378 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms