RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SAA2P0DJI9 122 aaPredicted RBP13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 PDZD11Q5EBL8 140 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 NMSQ5H8A3 153 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 ZNF714Q96N38 554 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 NIPSNAP3BQ9BS92 247 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 ARV1Q9H2C2 271 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 IL19Q9UHD0 177 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 IGHV1-69-2A0A0G2JMI3 117 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 ZNF134P52741 427 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 AWAT1Q58HT5 328 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 MBNL2Q5VZF2 373 aaKnown RBP13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 HCP5Q6MZN7 132 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 OR10G4Q8NGN3 311 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 OR10G9Q8NGN4 311 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 OR10G7Q8NGN6 311 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 PLEKHA3Q9HB20 300 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 RNF115Q9Y4L5 304 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 C9JQL5 133 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 RAB29O14966 203 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 OR9G9P0C7N8 305 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 TFF3Q07654 80 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 GCSAMLQ5JQS6 135 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 LHFPL4Q7Z7J7 247 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 CYB561D1Q8N8Q1 229 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 OR4S2Q8NH73 311 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 RNASE6Q93091 150 aaKnown RBP13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 RBFOX3A6NFN3 312 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 IGLV1-44P01699 117 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 SEC11BP0C7V7 166 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 GATA2P23769 480 aaPredicted RBP13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 NUBP1P53384 320 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 ID3Q02535 119 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 Q6ZSR3 168 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 RAB9BQ9NP90 201 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 MSRB2Q9Y3D2 182 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 A8MXK9 166 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 KLRB1Q12918 225 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 HMGN3Q15651 99 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 SAT2Q96F10 170 aaPredicted RBP13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 MED9Q9NWA0 146 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 SLC25A17O43808 307 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 IL34Q6ZMJ4 242 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 GAL3ST2Q9H3Q3 398 aa13.18□□□□□ -0.3
SMARCD1-202ENST00000394963 hCG_1809904A0A1W2PP81 198 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 A0A1W2PR64 198 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 A0A1W2PRV1 198 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 C10orf55Q5SWW7 151 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 PCGF1Q9BSM1 259 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 RAB19A4D1S5 217 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 E7EQL1 145 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 J3QR06 171 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 OR7C2O60412 319 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 OR5G3P0C626 314 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 FAM157CP0CG43 387 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 CT45A1Q5HYN5 189 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 OR13D1Q8NGV5 346 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 CT45A3Q8NHU0 189 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 IGHV3OR16-10A0A075B7F0 116 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 PIGBOS1A0A0B4J2F0 54 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 IFNL4K9M1U5 179 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 PITX3O75364 302 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 GAPDHP04406 335 aaKnown RBP13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 CEACAM8P31997 349 aaPredicted RBP13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 TGIF2LXQ8IUE1 241 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 MISP3Q96FF7 219 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 S4R3C0 116 aa13.17□□□□□ -0.3
SMARCD1-202ENST00000394963 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 IFNA1P01562 189 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 HOXD4P09016 255 aaPredicted RBP13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 DANCRP0C864 163 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 RAB31Q13636 194 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 MIC13Q5XKP0 118 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 ZNF355PQ9NSJ1 428 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 DYSFO75923 2080 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 KBTBD11-OT1A0A1B0GTJ5 212 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 NCBP2LA6PVI3 153 aaKnown RBP13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 TAS2R30P59541 319 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 ZNF429Q86V71 674 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 DSCAMO60469 2012 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 A0A1W2PPH5 198 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 IGKV1-16P04430 117 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 OPRK1P41145 380 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 LGALS4P56470 323 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 RND3P61587 244 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 RPEQ96AT9 228 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 TIMD4Q96H15 378 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 LURAP1Q96LR2 239 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 CABLES2Q9BTV7 478 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 PARP11Q9NR21 331 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 IDI2-AS1Q9NZ38 188 aa13.16□□□□□ -0.3
SMARCD1-202ENST00000394963 C7orf77A4D0Y5 90 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 HRASP01112 189 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 MMP9P14780 707 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 RAB7AP51149 207 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 TNXAQ16473 311 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 CLRN3Q8NCR9 226 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 SMIM7Q9BQ49 75 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 SLC35B3Q9H1N7 401 aa13.15□□□□□ -0.3
SMARCD1-202ENST00000394963 MBNL3Q9NUK0 354 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms