RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 KBTBD11O94819 623 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 LOXL3P58215 753 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 FAM89BQ8N5H3 189 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 IGHV3OR16-10A0A075B7F0 116 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 FHL1Q13642 323 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 PRNTQ86SH4 94 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 TUSC1Q2TAM9 212 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 OR4A5Q8NH83 315 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 NEU4Q8WWR8 484 aaPredicted RBP13.97□□□□□ -0.17
SCN3B-202ENST00000392770 GALNT14Q96FL9 552 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 EAF1Q96JC9 268 aaPredicted RBP13.97□□□□□ -0.17
SCN3B-202ENST00000392770 TRAV24A0A0B4J272 114 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 LOC102723971A0A1B0GUV8 181 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 HIST1H1BP16401 226 aaKnown RBP13.97□□□□□ -0.17
SCN3B-202ENST00000392770 PMS2P11Q13670 270 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 ZNF497Q6ZNH5 498 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 PLSCR4Q9NRQ2 329 aa13.97□□□□□ -0.17
SCN3B-202ENST00000392770 F5H697 171 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 DANCRP0C864 163 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 SLC16A13Q7RTY0 426 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 WFDC3Q8IUB2 231 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 EIF3GO75821 320 aaKnown RBP eCLIP13.96□□□□□ -0.17
SCN3B-202ENST00000392770 ORM1P02763 201 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.96□□□□□ -0.17
SCN3B-202ENST00000392770 CHODLQ9H9P2 273 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 TRBV6-7A0A0A0MS04 114 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 MRPL54Q6P161 138 aaKnown RBP13.96□□□□□ -0.17
SCN3B-202ENST00000392770 OR5AU1Q8NGC0 362 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 KIAA1671Q9BY89 1806 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 FANCMQ8IYD8 2048 aa13.96□□□□□ -0.17
SCN3B-202ENST00000392770 HSPB1P04792 205 aaKnown RBP13.96□□□□□ -0.18
SCN3B-202ENST00000392770 UCP1P25874 307 aa13.96□□□□□ -0.18
SCN3B-202ENST00000392770 LCN2P80188 198 aa13.96□□□□□ -0.18
SCN3B-202ENST00000392770 SELENOTP62341 195 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 LY6EQ16553 131 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 C5orf17Q8NAS9 161 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 NDUFB4O95168 129 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 PRSS3P2Q8NHM4 247 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 C18orf12Q96KH6 178 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 C5orf63A6NC05 138 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 ZNF735P0CB33 412 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 HIST1H1EP10412 219 aaKnown RBP13.95□□□□□ -0.18
SCN3B-202ENST00000392770 RABAC1Q9UI14 185 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 UFC1Q9Y3C8 167 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 CACNA1IQ9P0X4 2223 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 IGKV1-27A0A075B6S5 117 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 IGKV1-12A0A0C4DH73 117 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 MSGN1A6NI15 193 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 IGKV1D-12P01611 117 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 TIMP3P35625 211 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 PPOXP50336 477 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 LY6DQ14210 128 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 FOXH1O75593 365 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 CA2P00918 260 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 ARL14EPLP0DKL9 152 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 GBGT1Q8N5D6 347 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 TMPRSS5Q9H3S3 457 aa13.95□□□□□ -0.18
SCN3B-202ENST00000392770 AP4M1O00189 453 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 IL18BPO95998 194 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 HIST3H3Q16695 136 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 TOMM20LQ6UXN7 152 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 IGKV1D-13A0A0B4J2D9 117 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 E9PLN8 166 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 PHOX2AO14813 284 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 IGKV1-13P0DP09 117 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 KIR2DL2P43627 348 aaPredicted RBP13.94□□□□□ -0.18
SCN3B-202ENST00000392770 FHITP49789 147 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 MEF2CQ06413 473 aaPredicted RBP13.94□□□□□ -0.18
SCN3B-202ENST00000392770 SNRNP40Q96DI7 357 aaKnown RBP13.94□□□□□ -0.18
SCN3B-202ENST00000392770 VKORC1Q9BQB6 163 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 LINC00312Q9Y6C7 94 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 FUT9Q9Y231 359 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 TRAV14DV4A0A0A6YYC5 116 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 PF4V1P10720 104 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 NCMAPQ5T1S8 102 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 FXYD3Q14802 87 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 OR4A47Q6IF82 309 aa13.94□□□□□ -0.18
SCN3B-202ENST00000392770 MEF2BQ02080 365 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-202ENST00000392770 PEAR1Q5VY43 1037 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-202ENST00000392770 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 CBY1Q9Y3M2 126 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 NOTCH4Q99466 2003 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 MFAP4P55083 255 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 MBNL2Q5VZF2 373 aaKnown RBP13.93□□□□□ -0.18
SCN3B-202ENST00000392770 RAB24Q969Q5 203 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 PLAURQ03405 335 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 TMEM208Q9BTX3 173 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 MRPL20Q9BYC9 149 aaKnown RBP13.93□□□□□ -0.18
SCN3B-202ENST00000392770 GOLT1BQ9Y3E0 138 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 IGKV1D-8A0A087WSZ0 117 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 CRISP2P16562 243 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 NAT1P18440 290 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 ZCCHC24Q8N2G6 241 aaKnown RBP13.93□□□□□ -0.18
SCN3B-202ENST00000392770 VAMP8Q9BV40 100 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 SRD5A3Q9H8P0 318 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 RALGAPA1Q6GYQ0 2036 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 IER3P46695 156 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 RIGQ13278 110 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 LRP11Q86VZ4 500 aa13.93□□□□□ -0.18
SCN3B-202ENST00000392770 LAMTOR1Q6IAA8 161 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms