RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CGAP01215 116 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 ZNF324BQ6AW86 544 aaPredicted RBP13.85□□□□□ -0.19
SHANK1-204ENST00000391814 SYT8Q8NBV8 401 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 OR13C6PQ8NH95 151 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 IGHV4-39P01824 125 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 IL6RP08887 468 aaPredicted RBP13.85□□□□□ -0.19
SHANK1-204ENST00000391814 ID1P41134 155 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 RPS20P60866 119 aaKnown RBP13.85□□□□□ -0.19
SHANK1-204ENST00000391814 CKS1BP61024 79 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 RPL23P62829 140 aaKnown RBP13.85□□□□□ -0.19
SHANK1-204ENST00000391814 HEPN1Q6WQI6 88 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 ASCL5Q7RTU5 278 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 OR10J6PQ8NGY7 276 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 Q96M66 194 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 A0A0G2JK05 382 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 TTC9CQ8N5M4 171 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 C5orf30Q96GV9 206 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 GPR82Q96P67 336 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 TNFSF14O43557 240 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 IL11RAQ14626 422 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 KCNMB1Q16558 191 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 ACSF3Q4G176 576 aaPredicted RBP13.84□□□□□ -0.19
SHANK1-204ENST00000391814 NABP2Q9BQ15 211 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 LOC390937A0A1W2PQ73 354 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 DLEU1O43261 78 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 PSG9Q00887 426 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 MEIG1Q5JSS6 88 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 GOLT1AQ6ZVE7 132 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 PRELID3AQ96N28 172 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 TIMP4Q99727 224 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 MOB4Q9Y3A3 225 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 APOMO95445 188 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 PPP1R17O96001 155 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 RND2P52198 227 aa13.84□□□□□ -0.19
SHANK1-204ENST00000391814 TRBV20OR9-2A0A075B6H5 130 aa13.83□□□□□ -0.19
SHANK1-204ENST00000391814 FAM181BA6NEQ2 426 aa13.83□□□□□ -0.19
SHANK1-204ENST00000391814 TMEM250H0YL14 139 aa13.83□□□□□ -0.19
SHANK1-204ENST00000391814 TBR1Q16650 682 aa13.83□□□□□ -0.19
SHANK1-204ENST00000391814 CXCL1P09341 107 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 LIFP15018 202 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 PHLDA3Q9Y5J5 127 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 TRPM3Q9HCF6 1732 aaPredicted RBP13.83□□□□□ -0.2
SHANK1-204ENST00000391814 SFTA2Q6UW10 78 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 VCX2Q9H322 139 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 ADAMTSL1Q8N6G6 1762 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 NEUROG1Q92886 237 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 LEAP2Q969E1 77 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 KCNK17Q96T54 332 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 CITED2Q99967 270 aaPredicted RBP13.83□□□□□ -0.2
SHANK1-204ENST00000391814 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 IZUMO1RA6ND01 250 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 RRN3P1Q2M238 152 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 MUC21Q5SSG8 566 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 ANKRD33Q7Z3H0 272 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 LHFPL6Q9Y693 200 aa13.83□□□□□ -0.2
SHANK1-204ENST00000391814 LOXL3P58215 753 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 TMEM240Q5SV17 173 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 RNF126Q9BV68 326 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 CIRBPQ14011 172 aaKnown RBP13.82□□□□□ -0.2
SHANK1-204ENST00000391814 HAX1O00165 279 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 SOX8P57073 446 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 RPL31P62899 125 aaKnown RBP13.82□□□□□ -0.2
SHANK1-204ENST00000391814 CYP2G1PQ6ZSU1 146 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 A0A1W2PRS3 328 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 COLCA2A8K830 154 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 OR11H12B2RN74 326 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 TMEM92Q6UXU6 159 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 OR11H1Q8NG94 326 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 OR11H2Q8NH07 326 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 IGHV3-48P01763 117 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 LINC00305Q7Z4B0 112 aa13.82□□□□□ -0.2
SHANK1-204ENST00000391814 MRPL32Q9BYC8 188 aaKnown RBP13.82□□□□□ -0.2
SHANK1-204ENST00000391814 IGKV1-8A0A0C4DH67 115 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 FOXL2P58012 376 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 CT55Q8WUE5 264 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 RAB1BQ9H0U4 201 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 TMEM106BQ9NUM4 274 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 DLL3Q9NYJ7 618 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 ZNF257Q9Y2Q1 563 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 KIAA1217Q5T5P2 1943 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 TMEM14DPA8MWL7 114 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 OR4A5Q8NH83 315 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 OTOFQ9HC10 1997 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 LINC00614P0C842 121 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 TMEM170BQ5T4T1 132 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 SLC25A47Q6Q0C1 308 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 LURAP1LQ8IV03 231 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 TRAV8-4A0A0B4J246 113 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 AICDAQ9GZX7 198 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 NHP2Q9NX24 153 aaKnown RBP13.81□□□□□ -0.2
SHANK1-204ENST00000391814 PTPRFP10586 1907 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 CCL13Q99616 98 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 LHX9Q9NQ69 397 aa13.81□□□□□ -0.2
SHANK1-204ENST00000391814 RPL27AP46776 148 aaKnown RBP13.8□□□□□ -0.2
SHANK1-204ENST00000391814 C1QL4Q86Z23 238 aa13.8□□□□□ -0.2
SHANK1-204ENST00000391814 PRDM13Q9H4Q3 707 aa13.8□□□□□ -0.2
SHANK1-204ENST00000391814 CDX4O14627 284 aaPredicted RBP13.8□□□□□ -0.2
SHANK1-204ENST00000391814 RPL8P62917 257 aaKnown RBP13.8□□□□□ -0.2
SHANK1-204ENST00000391814 REG4Q9BYZ8 158 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms