RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PLCXD3Q63HM9 321 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 KNTC1P50748 2209 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 EXPH5Q8NEV8 1989 aa12.33□□□□□ -0.44
VPS9D1-201ENST00000389386 S1PR2O95136 353 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 CA2P00918 260 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 CLDN15P56746 228 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 PSG7Q13046 419 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 ST6GALNAC3Q8NDV1 305 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 ARRDC1-AS1Q9H2J1 176 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 RARRES3Q9UL19 164 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 DMXL1Q9Y485 3027 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM90A26D6RGX4 464 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 CELA2AP08217 269 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 LRRC10Q5BKY1 277 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 ERASQ7Z444 233 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 NFAM1Q8NET5 270 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 PIGCQ92535 297 aa12.32□□□□□ -0.44
VPS9D1-201ENST00000389386 PMS2P5A8MQ11 134 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 ZNF891A8MT65 544 aaPredicted RBP12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 C17orf112F2Z3M2 114 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 TNFSF11O14788 317 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 SYNGR3O43761 229 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 IGLV2-14P01704 120 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 STUMQ69YW2 141 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 C19orf35Q6ZS72 473 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 S100A7AQ86SG5 101 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 ZNF430Q9H8G1 570 aaPredicted RBP12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 KLRF1Q9NZS2 232 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 ZNF407Q9C0G0 2248 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 K7EN84 100 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 HSPB6O14558 160 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 VAMP5O95183 116 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 BCL3P20749 454 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 RAET1LQ5VY80 246 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 OR10G3Q8NGC4 313 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 RNF138Q8WVD3 245 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 WFDC12Q8WWY7 111 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 ZNF837Q96EG3 531 aaPredicted RBP12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 CLEC7AQ9BXN2 247 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 PMCHL1Q16048 86 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM27BQ5VT28 67 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 C20orf204Q6ZNR8 217 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 VASH2Q86V25 355 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 MMD2Q8IY49 270 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 IL19Q9UHD0 177 aa12.31□□□□□ -0.44
VPS9D1-201ENST00000389386 TRAV9-2A0A087WT02 112 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 hCG_38984A0A1B0GV85 526 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 SCO2A0A1W2PP80 73 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 TAX1BP3O14907 124 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 SRD5A2P31213 254 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 KIAA1644Q3SXP7 199 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 DCAF12Q5T6F0 453 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 FAM19A2Q8N3H0 131 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 OR4P4Q8NGL7 312 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 NAT8BQ9UHF3 227 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 PPP1R3CQ9UQK1 317 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 NBEAP1P0C6P0 100 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 RPEL1Q2QD12 228 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 GCSAMLQ5JQS6 135 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 PRAMEF20Q5VT98 475 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 OR1F12Q8NHA8 337 aa12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 BCL2L2Q92843 193 aaPredicted RBP12.3□□□□□ -0.44
VPS9D1-201ENST00000389386 TRAV38-1A0A0B4J264 116 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 LRP5LA4QPB2 252 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 GABRA2P47869 451 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 VWC2Q2TAL6 325 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 Q8N7P7 452 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 OR10P1Q8NGE3 313 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 TSKUQ8WUA8 353 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 TXNDC17Q9BRA2 123 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 IL36RNQ9UBH0 155 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 IGLV3-32A0A0A0MS00 114 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 MT-ND6P03923 174 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 IGLL1P15814 213 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 ZNF16P17020 682 aaPredicted RBP12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 PTGDSP41222 190 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 RHOBP62745 196 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 HTD2P86397 168 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 TMEM136Q6ZRR5 245 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 OR8I2Q8N0Y5 310 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 FGFRL1Q8N441 504 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 OR2M7Q8NG81 312 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 RAB1CQ92928 201 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 BORCS7Q96B45 105 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 SMIM12Q96EX1 92 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 TMEM204Q9BSN7 226 aa12.29□□□□□ -0.44
VPS9D1-201ENST00000389386 K7ERU9 68 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 CCL4P13236 92 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 FGF12P61328 243 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 RPS16P62249 146 aaKnown RBP12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 OR4A47Q6IF82 309 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 PRR27Q6MZM9 219 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 OR5A2Q8NGI9 324 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 ZNF596Q8TC21 504 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 IGLV3-12A0A075B6K2 115 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 G3V3Y1 287 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 H0YJW9 148 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms