RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
IFT88-203ENST00000389373 Q96MT0 163 aa7.08□□□□□ -1.28
IFT88-203ENST00000389373 FYTTD1Q96QD9 318 aaKnown RBP7.08□□□□□ -1.28
IFT88-203ENST00000389373 SPAG8Q99932 426 aaPredicted RBP7.08□□□□□ -1.28
IFT88-203ENST00000389373 DCUN1D5Q9BTE7 237 aa7.08□□□□□ -1.28
IFT88-203ENST00000389373 TMEM59Q9BXS4 323 aa7.08□□□□□ -1.28
IFT88-203ENST00000389373 KCNK15Q9H427 330 aa7.08□□□□□ -1.28
IFT88-203ENST00000389373 ZNF430Q9H8G1 570 aaPredicted RBP7.08□□□□□ -1.28
IFT88-203ENST00000389373 SDHAF2Q9NX18 166 aa7.08□□□□□ -1.28
IFT88-203ENST00000389373 BABAM2Q9NXR7 383 aa7.08□□□□□ -1.28
IFT88-203ENST00000389373 AK3Q9UIJ7 227 aa7.08□□□□□ -1.28
IFT88-203ENST00000389373 IGHV4-4A0A075B6R2 117 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 TRBV5-7A0A0A0MS05 114 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 C11orf94C9JXX5 98 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 EI24O14681 340 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 LALBAP00709 142 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 CLEC3BP05452 202 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 C8orf88P0DMB2 117 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 RRASP10301 218 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 RPA2P15927 270 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 GABRB1P18505 474 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 RPS11P62280 158 aaKnown RBP eCLIP7.07□□□□□ -1.28
IFT88-203ENST00000389373 RPS27AP62979 156 aaKnown RBP7.07□□□□□ -1.28
IFT88-203ENST00000389373 ZNF124Q15973 351 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 YIF1BQ5BJH7 314 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 CEACAM19Q7Z692 300 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 NR2C2APQ86WQ0 139 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 PYDC1Q8WXC3 89 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 GGHQ92820 318 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
IFT88-203ENST00000389373 RIMS4Q9H426 269 aaPredicted RBP7.07□□□□□ -1.28
IFT88-203ENST00000389373 C5orf66Q9H5L9 145 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 Q9N2K0 584 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 GHRLQ9UBU3 117 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 ZNF257Q9Y2Q1 563 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 UFC1Q9Y3C8 167 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 RPL36Q9Y3U8 105 aaKnown RBP7.07□□□□□ -1.28
IFT88-203ENST00000389373 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
IFT88-203ENST00000389373 IGKV1-6A0A0C4DH72 117 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 OR4C46A6NHA9 309 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 TSPAN4O14817 238 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 BET1O15155 118 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 SOCS1O15524 211 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 CREBL2O60519 120 aaPredicted RBP7.06□□□□□ -1.28
IFT88-203ENST00000389373 SAA1P0DJI8 122 aaPredicted RBP7.06□□□□□ -1.28
IFT88-203ENST00000389373 DEFA4P12838 97 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 TFPI2P48307 235 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 TPBGQ13641 420 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 CDK10Q15131 360 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 MMD2Q8IY49 270 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 CENPSQ8N2Z9 138 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 SETD9Q8NE22 299 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 OR6M1Q8NGM8 313 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 C5orf30Q96GV9 206 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 SLC29A1Q99808 456 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 UQCC2Q9BRT2 126 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 MGAT4AQ9UM21 535 aa7.06□□□□□ -1.28
IFT88-203ENST00000389373 TRBV6-6A0A0A6YYG2 114 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 TRAV10A0A0B4J240 114 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 MFSD2BA6NFX1 497 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 TRDCB7Z8K6 153 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 J3QRK9 145 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 RAB27BO00194 218 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 ZNF207O43670 478 aaKnown RBP7.05□□□□□ -1.28
IFT88-203ENST00000389373 REG1AP05451 166 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 CTSDP07339 412 aaPredicted RBP7.05□□□□□ -1.28
IFT88-203ENST00000389373 UBBP0CG47 229 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 MYOD1P15172 320 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 HLA-DMBP28068 263 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 GPR183P32249 361 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 RPL27AP46776 148 aaKnown RBP7.05□□□□□ -1.28
IFT88-203ENST00000389373 PLET1Q6UQ28 207 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 POM121L12Q8N7R1 296 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 NKAIN3Q8N8D7 197 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 RHOXF1Q8NHV9 184 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 FANCD2OSQ96PS1 177 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 DERL3Q96Q80 235 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 CMSS1Q9BQ75 279 aaKnown RBP7.05□□□□□ -1.28
IFT88-203ENST00000389373 FGF20Q9NP95 211 aaPredicted RBP7.05□□□□□ -1.28
IFT88-203ENST00000389373 MRPS18AQ9NVS2 196 aaKnown RBP7.05□□□□□ -1.28
IFT88-203ENST00000389373 CLEC2DQ9UHP7 191 aa7.05□□□□□ -1.28
IFT88-203ENST00000389373 IGKV3-7A0A075B6H7 116 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 IGLV2-18A0A075B6J9 118 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 IGHV3OR16-8A0A075B7F1 116 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 A0A0A6YYD4 124 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 TRBV7-1A0A0A6YYK4 115 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 LINC00473A8K010 186 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 NPIPB5A8MRT5 1133 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 TEX22C9J3V5 150 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 E7EUB6 86 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 FCGR3BO75015 233 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 DHFRP00374 187 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 CA1P00915 261 aaPredicted RBP7.04□□□□□ -1.28
IFT88-203ENST00000389373 IL6RP08887 468 aaPredicted RBP7.04□□□□□ -1.28
IFT88-203ENST00000389373 AREGP15514 252 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 MYL12AP19105 171 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 SRMP19623 302 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 GALP22466 123 aa7.04□□□□□ -1.28
IFT88-203ENST00000389373 PSMD7P51665 324 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms