RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SMIM12Q96EX1 92 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 MRPL32Q9BYC8 188 aaKnown RBP13.68□□□□□ -0.22
COL2A1-202ENST00000380518 CHCHD2Q9Y6H1 151 aaPredicted RBP13.68□□□□□ -0.22
COL2A1-202ENST00000380518 IGKV3D-11A0A0A0MRZ8 115 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 TMEM238LA0A1B0GVL6 79 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 A6NJY4 79 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 NPIPB6E9PJ23 425 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 CA7P43166 264 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 PSG9Q00887 426 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 MIEN1Q9BRT3 115 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 AUP1Q9Y679 476 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 ZIC3O60481 467 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 ARF6P62330 175 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 CLEC7AQ9BXN2 247 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 RAMP1O60894 148 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 FHITP49789 147 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 ZNF385CQ66K41 422 aaPredicted RBP13.67□□□□□ -0.22
COL2A1-202ENST00000380518 PGLYRP4Q96LB8 373 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 H3BVH4 76 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 FXYD3Q14802 87 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 ATP1A1-AS1Q5TC04 95 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 TM2D1Q9BX74 207 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 RAB9AP51151 201 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 C2orf83Q53S99 150 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 C12orf54Q6X4T0 127 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 SPATA45Q537H7 98 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 C19orf48Q6RUI8 117 aa13.67□□□□□ -0.22
COL2A1-202ENST00000380518 A0A0G2JK05 382 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 ZNF324O75467 553 aaPredicted RBP13.66□□□□□ -0.22
COL2A1-202ENST00000380518 EIF3GO75821 320 aaKnown RBP eCLIP13.66□□□□□ -0.22
COL2A1-202ENST00000380518 SRSF12Q8WXF0 261 aaKnown RBP13.66□□□□□ -0.22
COL2A1-202ENST00000380518 NPIPB3Q92617 1050 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 LOC101059948A0A1B0GTJ6 334 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 LIPFP07098 398 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 GFRA1P56159 465 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 C1QL2Q7Z5L3 287 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 VKORC1L1Q8N0U8 176 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 GPR61Q9BZJ8 451 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 MAP1LC3AQ9H492 121 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 RFPL3SP0C7P2 107 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 GLRXP35754 106 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 GALNT14Q96FL9 552 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 UQCR10Q9UDW1 63 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 IGHV1-69-2A0A0G2JMI3 117 aa13.66□□□□□ -0.22
COL2A1-202ENST00000380518 ZNF703Q9H7S9 590 aaPredicted RBP13.66□□□□□ -0.22
COL2A1-202ENST00000380518 MPTX1A8MV57 137 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 SRIP30626 198 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 CDX1P47902 265 aaPredicted RBP13.65□□□□□ -0.22
COL2A1-202ENST00000380518 RNFT1Q5M7Z0 435 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 RALYQ9UKM9 306 aaKnown RBP13.65□□□□□ -0.22
COL2A1-202ENST00000380518 STRCP1A6NGW2 1772 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 MYO16Q9Y6X6 1858 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.22
COL2A1-202ENST00000380518 CGB1A6NKQ9 187 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 ANOS1P23352 680 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 GCSHP23434 173 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 TCTAP57738 103 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 FAM106AQ4KMX7 169 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 DDB2Q92466 427 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 GCHFRP30047 84 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 PHLDA3Q9Y5J5 127 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 TRBV9A0A0B4J1U6 114 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 NRN1LQ496H8 165 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 TCF24Q7RTU0 167 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 TEX29Q8N6K0 151 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 HIST1H2BAQ96A08 127 aa13.65□□□□□ -0.22
COL2A1-202ENST00000380518 LOC105371242A0A075B767 164 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 ZNF506Q5JVG8 444 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 TIMM23BQ5SRD1 257 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 RAB37Q96AX2 223 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 GDF15Q99988 308 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 TMEM70Q9BUB7 260 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 CACNA1EQ15878 2313 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 B9A039 149 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 NPIPB11E5RHQ5 1161 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 GDF9O60383 454 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 SNRNP200O75643 2136 aaKnown RBP13.64□□□□□ -0.23
COL2A1-202ENST00000380518 REG1AP05451 166 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 FOLR2P14207 255 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 CX3CL1P78423 397 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 ZNRF1Q8ND25 227 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 FOXJ2Q9P0K8 574 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 TCF21O43680 179 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 COX6B1P14854 86 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 FAM53AQ6NSI3 398 aaPredicted RBP13.64□□□□□ -0.23
COL2A1-202ENST00000380518 IGKV1D-43A0A0B4J1Z2 117 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 CDK2AP1O14519 115 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 VENTXO95231 258 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 UCP1P25874 307 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 ZP1P60852 638 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 C19orf54Q5BKX5 351 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 C1QTNF12Q5T7M4 302 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 LINC00114Q6XXX2 140 aa13.64□□□□□ -0.23
COL2A1-202ENST00000380518 RCC1LQ96I51 464 aaKnown RBP13.64□□□□□ -0.23
COL2A1-202ENST00000380518 C12orf77C9JDV5 145 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 COX6CP09669 75 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 SFRP2Q96HF1 295 aa13.63□□□□□ -0.23
COL2A1-202ENST00000380518 FBLL1A6NHQ2 334 aaKnown RBP13.63□□□□□ -0.23
COL2A1-202ENST00000380518 TGFBR3LH3BV60 316 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms