RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 DEFA4P12838 97 aa13.56□□□□□ -0.24
VPS16-203ENST00000380469 EDDM3BP56851 147 aa13.56□□□□□ -0.24
VPS16-203ENST00000380469 CST9LP1Q5W188 147 aa13.56□□□□□ -0.24
VPS16-203ENST00000380469 KCNIP4Q6PIL6 250 aa13.56□□□□□ -0.24
VPS16-203ENST00000380469 OR1P1Q8NH06 330 aa13.56□□□□□ -0.24
VPS16-203ENST00000380469 ELOVL1Q9BW60 279 aa13.56□□□□□ -0.24
VPS16-203ENST00000380469 TRAV38-1A0A0B4J264 116 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 TRAV17A0A0B4J275 112 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 MGST3O14880 152 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 YPEL1O60688 119 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 CLEC12BQ2HXU8 276 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 TMEM249Q2WGJ8 235 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 FAM90A1Q86YD7 464 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 OR5T1Q8NG75 326 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 OR52E5Q8NH55 327 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 RAB1CQ92928 201 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 YPEL2Q96QA6 119 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 FAM234AQ9H0X4 552 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 PROCRQ9UNN8 238 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 A0A1B0GWJ7 208 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 XKRY2A2RUG3 117 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 PROP1O75360 226 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 EGR1P18146 543 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 BHLHA15Q7RTS1 189 aaPredicted RBP13.55□□□□□ -0.24
VPS16-203ENST00000380469 Q8N7P7 452 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 S1PR3Q99500 378 aa13.55□□□□□ -0.24
VPS16-203ENST00000380469 IGKV1D-17A0A075B6S4 117 aa13.54□□□□□ -0.24
VPS16-203ENST00000380469 SRRM5B3KS81 715 aa13.54□□□□□ -0.24
VPS16-203ENST00000380469 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.24
VPS16-203ENST00000380469 UBE2G2P60604 165 aa13.54□□□□□ -0.24
VPS16-203ENST00000380469 GAMTQ14353 236 aa13.54□□□□□ -0.24
VPS16-203ENST00000380469 PDLIM3Q53GG5 364 aaPredicted RBP13.54□□□□□ -0.24
VPS16-203ENST00000380469 GCSAMLQ5JQS6 135 aa13.54□□□□□ -0.24
VPS16-203ENST00000380469 ACY3Q96HD9 319 aa13.54□□□□□ -0.24
VPS16-203ENST00000380469 OPN3Q9H1Y3 402 aaPredicted RBP13.54□□□□□ -0.24
VPS16-203ENST00000380469 ZNF71Q9NQZ8 489 aaPredicted RBP13.54□□□□□ -0.24
VPS16-203ENST00000380469 KCNIP2Q9NS61 270 aa13.54□□□□□ -0.24
VPS16-203ENST00000380469 DUSP13Q9UII6 198 aa13.54□□□□□ -0.24
VPS16-203ENST00000380469 PRRC2CQ9Y520 2896 aaKnown RBP13.54□□□□□ -0.24
VPS16-203ENST00000380469 F6UZH7 168 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 GGCTO75223 188 aaKnown RBP13.53□□□□□ -0.24
VPS16-203ENST00000380469 CRYAAP02489 173 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 NPPCP23582 126 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 OPRK1P41145 380 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 KIR2DS2P43631 304 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 P2RY6Q15077 328 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 TMEM170AQ8WVE7 144 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 AHRRA9YTQ3 701 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 DVL1O14640 695 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 PKIAP61925 76 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 RPL39P5Q59GN2 51 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 VKORC1L1Q8N0U8 176 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 CISD2Q8N5K1 135 aaKnown RBP13.53□□□□□ -0.24
VPS16-203ENST00000380469 PTPRBP23467 1997 aa13.53□□□□□ -0.24
VPS16-203ENST00000380469 IGHV3OR15-7A0A075B7D8 119 aa13.52□□□□□ -0.24
VPS16-203ENST00000380469 CHRNA7P36544 502 aa13.52□□□□□ -0.24
VPS16-203ENST00000380469 GNB1P62873 340 aa13.52□□□□□ -0.24
VPS16-203ENST00000380469 CR1LQ2VPA4 569 aa13.52□□□□□ -0.24
VPS16-203ENST00000380469 COA6Q5JTJ3 125 aaKnown RBP13.52□□□□□ -0.24
VPS16-203ENST00000380469 IGFL2Q6UWQ7 119 aa13.52□□□□□ -0.24
VPS16-203ENST00000380469 TREML4Q6UXN2 200 aa13.52□□□□□ -0.24
VPS16-203ENST00000380469 OR5R1Q8NH85 324 aa13.52□□□□□ -0.24
VPS16-203ENST00000380469 PATZ1Q9HBE1 687 aaKnown RBP13.52□□□□□ -0.24
VPS16-203ENST00000380469 TSTD3H0UI37 97 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 F2RL2O00254 374 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 RRHO14718 337 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 NDUFB4O95168 129 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 CD99P14209 185 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 VDAC2P45880 294 aaPredicted RBP13.52□□□□□ -0.25
VPS16-203ENST00000380469 ATP5G3P48201 142 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 LINC01551Q86U37 167 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 FAM169BQ8N8A8 192 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 RNASEH2CQ8TDP1 164 aaKnown RBP13.52□□□□□ -0.25
VPS16-203ENST00000380469 TMEM37Q8WXS4 190 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 STARD4Q96DR4 205 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 TXNDC17Q9BRA2 123 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 FUT9Q9Y231 359 aa13.52□□□□□ -0.25
VPS16-203ENST00000380469 TMPRSS2O15393 492 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 GALR2O43603 387 aaPredicted RBP13.51□□□□□ -0.25
VPS16-203ENST00000380469 IGHV3-13P01766 116 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 IGHV3-7P01780 117 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 AMBPP02760 352 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 TYMSP04818 313 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 BMP5P22003 454 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 TMPRSS3P57727 454 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 LOXL3P58215 753 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 RELBQ01201 579 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 SRSF6Q13247 344 aaKnown RBP13.51□□□□□ -0.25
VPS16-203ENST00000380469 ACTL10Q5JWF8 245 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 Q8TCH9 128 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 SDSLQ96GA7 329 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 BTF3L4Q96K17 158 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 TMEM140Q9NV12 185 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 PXMP4Q9Y6I8 212 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 PCNX2A6NKB5 2137 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 GFRA3O60609 400 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 TNFSF13O75888 250 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 CXorf1O96002 111 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 CFHR2P36980 270 aa13.51□□□□□ -0.25
VPS16-203ENST00000380469 ZNF134P52741 427 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms