RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GCSAMLQ5JQS6 135 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 RIPPLY2Q5TAB7 128 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 C6orf15Q6UXA7 325 aaPredicted RBP10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 MDP1Q86V88 176 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 OR2M7Q8NG81 312 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 MRGPRDQ8TDS7 321 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 OR2D2Q9H210 308 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 SH2D2AQ9NP31 389 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 OBP2BQ9NPH6 170 aa10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 RYDENQ9NUL5 291 aaKnown RBP10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 INTS1Q8N201 2190 aaKnown RBP10.49□□□□□ -0.73
PRPF40B-202ENST00000380281 C1QTNF9BB2RNN3 333 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 WISP2O76076 250 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 OR2H2O95918 312 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 IGKV1D-33P01593 117 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 IGKV1-33P01594 117 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 FABP6P51161 128 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 SMIM15Q7Z3B0 74 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 ATOH7Q8N100 152 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 GSX1Q9H4S2 264 aaPredicted RBP10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 PLSCR2Q9NRY7 297 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 MDH2P40926 338 aaKnown RBP10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 COMPP49747 757 aaPredicted RBP10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 SLC38A11Q08AI6 406 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 ZNF324BQ6AW86 544 aaPredicted RBP10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 KCNIP4Q6PIL6 250 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 FGFRL1Q8N441 504 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 TMEM251Q8N6I4 163 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 CNEP1R1Q8N9A8 125 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 OR5AU1Q8NGC0 362 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 WDYHV1Q96HA8 205 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 WIPI2Q9Y4P8 454 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 PXMP4Q9Y6I8 212 aa10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 ZFHX2Q9C0A1 2572 aaPredicted RBP10.48□□□□□ -0.73
PRPF40B-202ENST00000380281 H0Y980 276 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 GFRA1P56159 465 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 GNG3P63215 75 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 FBLN7Q53RD9 439 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 VKORC1L1Q8N0U8 176 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 DRAM1Q8N682 238 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 TTTY12Q9BZ98 90 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 PRDM14Q9GZV8 571 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 ZDHHC11Q9H8X9 412 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 NEURL1O76050 574 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 IFNA1P01562 189 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 SERPINA7P05543 415 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 RPP25LQ8N5L8 163 aaKnown RBP10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 OR5D13Q8NGL4 314 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 OR5P3Q8WZ94 311 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 LOXL4Q96JB6 756 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 WNT10AQ9GZT5 417 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 FBXL7Q9UJT9 491 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 ADAMTS20P59510 1910 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 ZG16O60844 167 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 CBLN1P23435 193 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 SUMO1P63165 101 aaKnown RBP10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 TFF3Q07654 80 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 ZNF525Q8N782 197 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 ST6GALNAC3Q8NDV1 305 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 ZNF738Q8NE65 137 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 POM121L2Q96KW2 1035 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 IL36GQ9NZH8 169 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 COX11Q9Y6N1 276 aa10.47□□□□□ -0.73
PRPF40B-202ENST00000380281 TACC2O95359 2948 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 DIRC3C9JPN6 131 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 HYPMO75409 117 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 TYMSP04818 313 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 LHX2P50458 406 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 PPP1CBP62140 327 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 MSMO1Q15800 293 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 VAMP3Q15836 100 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 ZNF585BQ52M93 769 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 CENPVQ7Z7K6 275 aaPredicted RBP10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 BAGE3Q86Y29 109 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 BAGE2Q86Y30 109 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 MBD3L1Q8WWY6 194 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 HINT2Q9BX68 163 aa10.46□□□□□ -0.73
PRPF40B-202ENST00000380281 CACNA1BQ00975 2339 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 TMEM238C9JI98 176 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 PAGE4O60829 102 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 EDDM3BP56851 147 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 CLDN18P56856 261 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 UBE2NP61088 152 aaKnown RBP10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 RPL30P62888 115 aaKnown RBP10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 PRAMEF6Q5VXH4 476 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 SCCPDHQ8NBX0 429 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 OR5A2Q8NGI9 324 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 ANAPC16Q96DE5 110 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 STARD4Q96DR4 205 aa10.46□□□□□ -0.74
PRPF40B-202ENST00000380281 DUXBA0A1W2PPF3 345 aa10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 C1QTNF9P0C862 333 aa10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 SSTR5P35346 364 aa10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 SRP14P37108 136 aaKnown RBP10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 WDR86Q86TI4 376 aa10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 SGMS2Q8NHU3 365 aa10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 B4GALT7Q9UBV7 327 aa10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 PLXNB1O43157 2135 aa10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 TRAV38-1A0A0B4J264 116 aa10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 PSPNO60542 156 aa10.45□□□□□ -0.74
PRPF40B-202ENST00000380281 S1PR2O95136 353 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms