RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 USF1P22415 310 aaPredicted RBP9.6□□□□□ -0.87
SMAD9-202ENST00000379826 ACP1P24666 158 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 ARL16Q0P5N6 197 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 ABLIM2Q6H8Q1 611 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 TMEM108Q6UXF1 575 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 Q6ZRM9 215 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 DTX1Q86Y01 620 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 THADAQ6YHU6 1953 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 KIAA1644Q3SXP7 199 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 DCTN5Q9BTE1 182 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 SCO2A0A1W2PP80 73 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 ZNF253O75346 499 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 OTX1P32242 354 aaPredicted RBP9.6□□□□□ -0.87
SMAD9-202ENST00000379826 CAMPP49913 170 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 UCP2P55851 309 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 FAM90A2PQ658T7 463 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 C22orf15Q8WYQ4 148 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 CORO2AQ92828 525 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 POM121L2Q96KW2 1035 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 PKIBQ9C010 78 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 CRIM1Q9NZV1 1036 aa9.6□□□□□ -0.87
SMAD9-202ENST00000379826 HELTA6NFD8 242 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 FAM157AC9JC47 383 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 GNLYP22749 145 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 ATP1A1-AS1Q5TC04 95 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 MOGAT3Q86VF5 341 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 LURAP1LQ8IV03 231 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 OR5R1Q8NH85 324 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 LYPD6BQ8NI32 183 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 IGKV1-6A0A0C4DH72 117 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 CLDN14O95500 239 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 TIPARPQ7Z3E1 657 aaKnown RBP9.59□□□□□ -0.87
SMAD9-202ENST00000379826 ZBTB34Q8NCN2 500 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 C12orf77C9JDV5 145 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 IGKV1-5P01602 117 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 NTF4P34130 210 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 COMMD5Q9GZQ3 224 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 SSUH2Q9Y2M2 353 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 DIRC3C9JPN6 131 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 RAB29O14966 203 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 KLF7O75840 302 aaPredicted RBP9.59□□□□□ -0.87
SMAD9-202ENST00000379826 ADMP35318 185 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 OR5I1Q13606 314 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 RPL39P5Q59GN2 51 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 TMEM42Q69YG0 159 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 OR10X1Q8NGY0 326 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 PPP1R14DQ9NXH3 145 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 SLC45A2Q9UMX9 530 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 NUP210LQ5VU65 1888 aa9.59□□□□□ -0.87
SMAD9-202ENST00000379826 TRGV10A0A0A0MS01 117 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 TCF21O43680 179 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 LINC00205P59089 165 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 C1orf185Q5T7R7 199 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 TEPPQ6URK8 271 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 MISP3Q96FF7 219 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 CABIN1Q9Y6J0 2220 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 APOA2P02652 100 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 SP1P08047 785 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 TCF15Q12870 199 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 ZNF726P1Q15940 193 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 TMEM170AQ8WVE7 144 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 TMEM45BQ96B21 275 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 DERL1Q9BUN8 251 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 ZNF703Q9H7S9 590 aaPredicted RBP9.58□□□□□ -0.88
SMAD9-202ENST00000379826 A6NNC1 897 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 FAM90A26D6RGX4 464 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 OPRK1P41145 380 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 ATOH7Q8N100 152 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 TIMM9Q9Y5J7 89 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 HSBP1O75506 76 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 APELAP0DMC3 54 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 Q0VFX4 171 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 SPATA45Q537H7 98 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 PQLC2Q6ZP29 291 aa9.58□□□□□ -0.88
SMAD9-202ENST00000379826 TMEM210A6NLX4 147 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 NAPSAO96009 420 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 PRDX2P32119 198 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 PAX9P55771 341 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 TRAT1Q6PIZ9 186 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 FOXL2NBQ6ZUU3 175 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 WDYHV1Q96HA8 205 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 FOXJ2Q9P0K8 574 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 ZNF835Q9Y2P0 537 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 RP1P56715 2156 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 LOC102723996A0A087X1L8 192 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 HPRT1P00492 218 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 MPV17P39210 176 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 JOSD1Q15040 202 aaPredicted RBP9.57□□□□□ -0.88
SMAD9-202ENST00000379826 OR4S2Q8NH73 311 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 MBD3L1Q8WWY6 194 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 CBY1Q9Y3M2 126 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 OR51B2Q9Y5P1 312 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 TMEM250H0YL14 139 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 M0R2Z0 102 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 UBE2L3P68036 154 aaKnown RBP9.57□□□□□ -0.88
SMAD9-202ENST00000379826 TBR1Q16650 682 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 RPP25LQ8N5L8 163 aaKnown RBP9.57□□□□□ -0.88
SMAD9-202ENST00000379826 KLF14Q8TD94 323 aaPredicted RBP9.57□□□□□ -0.88
SMAD9-202ENST00000379826 PERPQ96FX8 193 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 ERHP84090 104 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms