RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 TCTEX1D2Q8WW35 142 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 GIMAP1Q8WWP7 306 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 DCUN1D4Q92564 292 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 KCTD12Q96CX2 325 aaKnown RBP11.88□□□□□ -0.51
RAB4B-202ENST00000378307 RHOVQ96L33 236 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 DCUN1D5Q9BTE7 237 aa11.88□□□□□ -0.51
RAB4B-202ENST00000378307 SEC14L6B5MCN3 397 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 HPGDSO60760 199 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 RAMP3O60896 148 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 PMP2P02689 132 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 TRGV3P03979 118 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 LGALS1P09382 135 aaKnown RBP11.87□□□□□ -0.51
RAB4B-202ENST00000378307 NAT1P18440 290 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 ELK1P19419 428 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 ALDH3B2P48448 385 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 CDK10Q15131 360 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 TNXAQ16473 311 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 C10orf55Q5SWW7 151 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 GPR107Q5VW38 600 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 PYHIN1Q6K0P9 492 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 ZNF818PQ6ZRF7 136 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 LYSMD2Q8IV50 215 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 POC5Q8NA72 575 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
RAB4B-202ENST00000378307 HSD17B10Q99714 261 aaKnown RBP11.87□□□□□ -0.51
RAB4B-202ENST00000378307 IFT46Q9NQC8 304 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 ZNF355PQ9NSJ1 428 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 PRELID3BQ9Y3B1 194 aa11.87□□□□□ -0.51
RAB4B-202ENST00000378307 OR8U8P0C7N1 319 aa11.86□□□□□ -0.51
RAB4B-202ENST00000378307 PRSS3P35030 304 aa11.86□□□□□ -0.51
RAB4B-202ENST00000378307 ZNF66Q6ZN08 573 aa11.86□□□□□ -0.51
RAB4B-202ENST00000378307 GPX8Q8TED1 209 aa11.86□□□□□ -0.51
RAB4B-202ENST00000378307 SRSF12Q8WXF0 261 aaKnown RBP11.86□□□□□ -0.51
RAB4B-202ENST00000378307 ACOT12Q8WYK0 555 aa11.86□□□□□ -0.51
RAB4B-202ENST00000378307 GPR61Q9BZJ8 451 aa11.86□□□□□ -0.51
RAB4B-202ENST00000378307 SLC5A7Q9GZV3 580 aa11.86□□□□□ -0.51
RAB4B-202ENST00000378307 SLA2Q9H6Q3 261 aa11.86□□□□□ -0.51
RAB4B-202ENST00000378307 EHFQ9NZC4 300 aa11.86□□□□□ -0.51
RAB4B-202ENST00000378307 MRPS7Q9Y2R9 242 aaKnown RBP11.86□□□□□ -0.51
RAB4B-202ENST00000378307 E7EUB6 86 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 LINC01619G3V211 115 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 APOA1P02647 267 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 RORCP51449 518 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 DYRK1AQ13627 763 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 C9orf66Q5T8R8 295 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 DHRS11Q6UWP2 260 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 TMEM17Q86X19 198 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 PUSL1Q8N0Z8 303 aaKnown RBP11.85□□□□□ -0.51
RAB4B-202ENST00000378307 DPF1Q92782 380 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 MRPS26Q9BYN8 205 aaKnown RBP11.85□□□□□ -0.51
RAB4B-202ENST00000378307 TINAGL1Q9GZM7 467 aaPredicted RBP11.85□□□□□ -0.51
RAB4B-202ENST00000378307 COL7A1Q02388 2944 aa11.85□□□□□ -0.51
RAB4B-202ENST00000378307 A0A1B0GW64 132 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 SULT1C2O00338 296 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 PRH1P02810 166 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
RAB4B-202ENST00000378307 MYOD1P15172 320 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 HLA-DMAP28067 261 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 GNRHRP30968 328 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 MSMO1Q15800 293 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 DEFB121Q5J5C9 76 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 SSX9Q7RTT3 188 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 SNX29P2Q8IUI4 249 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 ADAD2Q8NCV1 583 aaKnown RBP11.84□□□□□ -0.51
RAB4B-202ENST00000378307 OR4S2Q8NH73 311 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 TMEM68Q96MH6 324 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 CMTM3Q96MX0 182 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 PHB2Q99623 299 aa11.84□□□□□ -0.51
RAB4B-202ENST00000378307 HUWE1Q7Z6Z7 4374 aaKnown RBP11.83□□□□□ -0.51
RAB4B-202ENST00000378307 HMX3A6NHT5 357 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 H3BUA1 57 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 OVOL1O14753 267 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 BRI3O95415 125 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 IL6RP08887 468 aaPredicted RBP11.83□□□□□ -0.52
RAB4B-202ENST00000378307 CD40LGP29965 261 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 HRH1P35367 487 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 DGCR2P98153 550 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 ZNF45Q02386 682 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 SPCS2Q15005 226 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 C19orf35Q6ZS72 473 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 MMD2Q8IY49 270 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 SPAG16Q8N0X2 631 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 ZBTB34Q8NCN2 500 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 PRR25Q96S07 402 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 ZNF2Q9BSG1 426 aaPredicted RBP11.83□□□□□ -0.52
RAB4B-202ENST00000378307 FXYD6Q9H0Q3 95 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 COA4Q9NYJ1 87 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 SORL1Q92673 2214 aa11.83□□□□□ -0.52
RAB4B-202ENST00000378307 TRAV3A0A0B4J244 114 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 ANKRD34BA5PLL1 514 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 TEX22C9J3V5 150 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 KBTBD11O94819 623 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 OR2A4O95047 310 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 TRBV12-3P01733 135 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 ZNF182P17025 639 aaPredicted RBP11.82□□□□□ -0.52
RAB4B-202ENST00000378307 ECI1P42126 302 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 GPR141Q7Z602 305 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 OR5H2Q8NGV7 314 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 OR51H1Q8NH63 302 aa11.82□□□□□ -0.52
RAB4B-202ENST00000378307 TMEM167AQ8TBQ9 72 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms